ggKbase home page

RifSed_csp2_16ft_2_scaffold_7448

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_2_scaffold_7448_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1..1221
DNA (1221bp) protein (407aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB65_ACIB4
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1218..2006)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp2_16ft_2_scaffold_7448_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2041..3069)
DNA (1029bp) protein (343aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3107..10261)
DNA (7155bp) protein (2385aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NH34_KITSK
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_7448_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10332..10844
DNA (513bp) protein (171aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_7448_6
unknown

Not on your lists

comp(10861..11028)
DNA (168bp) protein (56aa)

This feature has no annotations

RifSed_csp2_16ft_2_scaffold_7448_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11089..11766)
DNA (678bp) protein (226aa)
Ribulose-phosphate 3-epimerase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKK6_AZOBR
cbbE; ribulose-phosphate 3-epimerase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_7448_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11849..12751
DNA (903bp) protein (301aa)
Transketolase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XCS1_THEPJ
transketolase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12778..13713
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003736E9C
Transketolase, C-terminal subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(13725..14351)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV3_NITGG
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
RifSed_csp2_16ft_2_scaffold_7448_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14465..14737)
DNA (273bp) protein (91aa)
hypothetical protein id=14424889 bin=bin1_lowGC species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_7448_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14824..15849
DNA (1026bp) protein (342aa)
metal-binding transmembrane protein id=14627813 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
metal-binding transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
RifSed_csp2_16ft_2_scaffold_7448_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16059..16706
DNA (648bp) protein (216aa)
putative translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=TAL_CALS8
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16802..17707
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJK8_MYCVA
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17709..18380
DNA (672bp) protein (224aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18377..19327
DNA (951bp) protein (317aa)
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY42_ROSS1
ATPase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19330..20595
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3H4_ANATU
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_18
unknown

Not on your lists

20580..21167
DNA (588bp) protein (196aa)

This feature has no annotations

RifSed_csp2_16ft_2_scaffold_7448_trna_1
unknown

Not on your lists

21234..21306
DNA (73bp)
transferRNA Asp
RifSed_csp2_16ft_2_scaffold_7448_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

21376..21681
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F494
regulatory protein ArsR
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_7448_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21734..22021
DNA (288bp) protein (96aa)
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp2_16ft_2_scaffold_7448_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


comp(22025..23200)
DNA (1176bp) protein (392aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YQJ9_9EURY
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 22 items

View Taxonomy