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RifSed_csp2_16ft_3_scaffold_7524

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_7524_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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49..216
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71046.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_7524_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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237..1163
DNA (927bp) protein (309aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71047.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_7524_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1282..1761
DNA (480bp) protein (160aa)
Peptidase family protein {ECO:0000313|EMBL:KCZ72884.1}; EC=3.2.1.4 {ECO:0000313|EMBL:KCZ72884.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cellulase (EC:3.2.1.4)
Archaeal aminopeptidase or endoglucanase M Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XZ9_METBU
RifSed_csp2_16ft_3_scaffold_7524_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1781..2872)
DNA (1092bp) protein (364aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Ethylbenzene dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_7524_5

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3047..4534
DNA (1488bp) protein (496aa)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBH39037.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBH39037.1};; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Diaminopimelate decarboxylase Tax=uncultured archaeon RepID=D1JAA7_9ARCH
Orn/DAP/Arg decarboxylase 2
RifSed_csp2_16ft_3_scaffold_7524_trna_1
unknown

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comp(4516..4587)
DNA (72bp)
transferRNA Gly
RifSed_csp2_16ft_3_scaffold_7524_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4675..5706
DNA (1032bp) protein (344aa)
Small-conductance mechanosensitive channel Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHZ2_METFS
small-conductance mechanosensitive channel
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_7524_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5708..6139
DNA (432bp) protein (144aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_7524_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6153..6704
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKI2_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72726.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_7524_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6701..7306
DNA (606bp) protein (202aa)
UPI0003D1B9AE related cluster Tax=unknown RepID=UPI0003D1B9AE
6-phospho-3-hexuloisomerase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_7524_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7306..8412
DNA (1107bp) protein (369aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:KCZ72724.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KCZ72724.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Aminotransferase class I and II Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB95_METEZ
class I/II aminotransferase
RifSed_csp2_16ft_3_scaffold_7524_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8372..9211)
DNA (840bp) protein (280aa)
Soluble P-type ATPase-like phosphatase (EC:3.6.3.-)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIZ0_METAC
Soluble P-type ATPase {ECO:0000313|EMBL:KCZ72912.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_7524_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9283..11247)
DNA (1965bp) protein (655aa)
UPI0003D1A98A related cluster Tax=unknown RepID=UPI0003D1A98A
Archaeal flagella assembly protein J {ECO:0000313|EMBL:KCZ72584.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type II secretion system F domain-containing protein
RifSed_csp2_16ft_3_scaffold_7524_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11253..13550)
DNA (2298bp) protein (766aa)
Type II secretion system protein E Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E882_METEZ
ATPase, type IV secretory pathway VirB11 component like protein {ECO:0000313|EMBL:KCZ72585.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type II secretion system protein E
Displaying 14 items

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