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RifSed_csp2_16ft_3_scaffold_4545

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_4545_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(119..469)
DNA (351bp) protein (117aa)
F420H2 dehydrogenase, subunit FpoO Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7E7_METMS
F420H2 dehydrogenase subunit O {ECO:0000313|EMBL:KCZ72533.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
F420H2 dehydrogenase, subunit FpoO
RifSed_csp2_16ft_3_scaffold_4545_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(474..1934)
DNA (1461bp) protein (487aa)
F420H2 dehydrogenase subunit N {ECO:0000313|EMBL:KCZ72534.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72534.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
F420H2 dehydrogenase subunit N Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7E8_METMS
F420H2 dehydrogenase subunit N
RifSed_csp2_16ft_3_scaffold_4545_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1931..3424)
DNA (1494bp) protein (498aa)
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:KCZ72535.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72535.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Proton-translocating NADH-quinone oxidoreductase, chain M Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6I7_METEZ
proton-translocating NADH-quinone oxidoreductase subunit M
RifSed_csp2_16ft_3_scaffold_4545_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3446..5443)
DNA (1998bp) protein (666aa)
F420H2 dehydrogenase subunit L {ECO:0000313|EMBL:KCZ72536.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72536.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPK4_METZD
RifSed_csp2_16ft_3_scaffold_4545_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5445..5747)
DNA (303bp) protein (101aa)
NADH:ubiquinone oxidoreductase subunit 11 or 4L (Chain K) {ECO:0000313|EMBL:KCZ72537.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72537.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1C60C related cluster Tax=unknown RepID=UPI0003D1C60C
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)
RifSed_csp2_16ft_3_scaffold_4545_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5747..5995)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72538.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
F(420)H(2) dehydrogenase, subunit FpoJ
RifSed_csp2_16ft_3_scaffold_4545_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5985..6236)
DNA (252bp) protein (84aa)
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) {ECO:0000313|EMBL:KCZ72539.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative NADH-quinone oxidoreductase chain J bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
RifSed_csp2_16ft_3_scaffold_4545_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(6236..6652)
DNA (417bp) protein (139aa)
NADH-quinone oxidoreductase subunit I
NADH-quinone oxidoreductase subunit I bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4545_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6653..7744)
DNA (1092bp) protein (364aa)
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
F(420)H(2) oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; F(420)H(2) dehydrogenase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; FPO subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_4545_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(7749..8897)
DNA (1149bp) protein (383aa)
NADH-quinone oxidoreductase subunit D Tax=Dehalococcoides sp. (strain VS) RepID=D2BHX7_DEHSV
nuoD; NADH:quinone oxidoreductase 49 kD subunit 7
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4545_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(8899..9402)
DNA (504bp) protein (168aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
Uncharacterized protein Tax=Thermoplasmatales archaeon I-plasma RepID=T0LN11_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4545_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9399..10013)
DNA (615bp) protein (205aa)
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT2_9FIRM
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_4545_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9980..10354)
DNA (375bp) protein (125aa)
NADH:ubiquinone oxidoreductase subunit 3 (Chain A) {ECO:0000313|EMBL:KCZ72545.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72545.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NADH dehydrogenase I subunit A Tax=uncultured prokaryote RepID=H5SPA0_9ZZZZ
NADH dehydrogenase (ubiquinone), subunit A
RifSed_csp2_16ft_3_scaffold_4545_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10445..11566
DNA (1122bp) protein (374aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSV2_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4545_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11563..11964)
DNA (402bp) protein (134aa)
Sjogrens syndrome scleroderma autoantigen 1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B953_METTP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4545_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12045..12314
DNA (270bp) protein (90aa)
UPF0147 protein UNCMA_18170 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5G2_UNCMA
UPF0147 protein ANME2D_00978 {ECO:0000256|HAMAP-Rule:MF_00342}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_4545_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12755..14017
DNA (1263bp) protein (421aa)
ORC1-type DNA replication protein 1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=CDC61_METMA
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cdc6; cell division control protein 6
RifSed_csp2_16ft_3_scaffold_4545_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14006..14581)
DNA (576bp) protein (192aa)
Peptidase S26B, signal peptidase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R4_METEZ
Signal peptidase I {ECO:0000313|EMBL:KCZ72551.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase S26B, signal peptidase
RifSed_csp2_16ft_3_scaffold_4545_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14646..16091
DNA (1446bp) protein (482aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed DNA polymerase Tax=Methanolobus psychrophilus R15 RepID=K4MCR0_9EURY
DNA-directed DNA polymerase
RifSed_csp2_16ft_3_scaffold_4545_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16093..16839
DNA (747bp) protein (249aa)
Putative exonuclease Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1R9_METHD
putative exonuclease
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_4545_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17024..17353
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JIW6_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72452.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying 21 items

View Taxonomy