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RifSed_csp2_16ft_3_scaffold_9139

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_9139_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..315
DNA (315bp) protein (105aa)
Formylmethanofuran dehydrogenase, subunit A {ECO:0000313|EMBL:KCZ72275.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72275.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tungsten formylmethanofuran dehydrogenase, subunit A Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM96_METH6
Tungsten formylmethanofuran dehydrogenase, subunit A
RifSed_csp2_16ft_3_scaffold_9139_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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317..1075
DNA (759bp) protein (253aa)
Formylmethanofuran dehydrogenase, subunit C {ECO:0000313|EMBL:KCZ72276.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72276.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tungsten formylmethanofuran dehydrogenase subunit C (EC:1.2.99.5)
Tungsten formylmethanofuran dehydrogenase, subunit C Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVI5_METMA
RifSed_csp2_16ft_3_scaffold_9139_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1153..1617
DNA (465bp) protein (155aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_9139_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1625..2467
DNA (843bp) protein (281aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2468..3394)
DNA (927bp) protein (309aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3473..3919
DNA (447bp) protein (149aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4018..4620
DNA (603bp) protein (201aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4704..5465
DNA (762bp) protein (254aa)
Hypothetical membrane protein Tax=uncultured archaeon RepID=D1JH51_9ARCH
peptidase S24/S26A/S26B, conserved region
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5449..7170
DNA (1722bp) protein (574aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00037DBB21
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7207..7932
DNA (726bp) protein (242aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7907..8965
DNA (1059bp) protein (353aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8891..9760)
DNA (870bp) protein (290aa)
Xylose isomerase domain protein TIM barrel Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKQ5_METZD
xylose isomerase domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_9139_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(9761..10285)
DNA (525bp) protein (175aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000369DF41
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_9139_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10323..11189
DNA (867bp) protein (289aa)
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72569.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KCZ72569.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
guaB-2; putative inosine-5\'-monophosphate dehydrogenase (EC:1.1.1.205)
Putative inosine-5\'-monophosphate dehydrogenase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1M4_UNCMA
RifSed_csp2_16ft_3_scaffold_9139_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11183..12058)
DNA (876bp) protein (292aa)
Putative signal transduction protein with CBS domains Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB97_METEZ
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72570.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative signal transduction protein
RifSed_csp2_16ft_3_scaffold_9139_16
unknown

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comp(12140..12259)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 16 items

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