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RifSed_csp2_19ft_2_scaffold_5659

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_2_scaffold_5659_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2..232
DNA (231bp) protein (77aa)
Ribosomal protein S17, archaeal Tax=mine drainage metagenome RepID=T1B4J6_9ZZZZ
30S ribosomal protein S17
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp2_19ft_2_scaffold_5659_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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229..627
DNA (399bp) protein (133aa)
50S ribosomal protein L14 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_19ft_2_scaffold_5659_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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637..996
DNA (360bp) protein (120aa)
50S ribosomal protein L24P Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECF5_PYRF1
50S ribosomal protein L24
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_19ft_2_scaffold_5659_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1004..1726
DNA (723bp) protein (241aa)
30S ribosomal protein S4e Tax=Aciduliprofundum sp. (strain MAR08-339) PF6_ACIS0">RepID=L0HPF6_ACIS0
ribosomal protein S4E
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_19ft_2_scaffold_5659_5

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1735..2235
DNA (501bp) protein (167aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000372A27B
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L5P
RifSed_csp2_19ft_2_scaffold_5659_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2232..2378
DNA (147bp) protein (49aa)
30S ribosomal protein S14 type Z Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Y0_9EURY
rps14P; 30S ribosomal protein S14P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_19ft_2_scaffold_5659_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2388..2777
DNA (390bp) protein (130aa)
30S ribosomal protein S8 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D309E
SSU ribosomal protein S15Ae (S8p)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_19ft_2_scaffold_5659_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2786..3331
DNA (546bp) protein (182aa)
50S ribosomal protein L6 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6E9_METSF
50S ribosomal protein L6
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_19ft_2_scaffold_5659_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3333..4094
DNA (762bp) protein (254aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000377A3F2
rpl32e; 50S ribosomal protein L32e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_19ft_2_scaffold_5659_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4094..4558
DNA (465bp) protein (155aa)
50S ribosomal protein L19e Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BI70_9EURY
LSU ribosomal protein L19E
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_19ft_2_scaffold_5659_11

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4555..5055
DNA (501bp) protein (167aa)
50S ribosomal protein L18 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
RifSed_csp2_19ft_2_scaffold_5659_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5055..5855
DNA (801bp) protein (267aa)
30S ribosomal protein S5 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5J5_9EURY
rps5p; 30S ribosomal protein S5P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_19ft_2_scaffold_5659_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5852..6331
DNA (480bp) protein (160aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003676426
rpl30p; 50S ribosomal protein L30P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_19ft_2_scaffold_5659_14

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6331..6765
DNA (435bp) protein (145aa)
Ribosomal protein L15 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U5F2_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
RifSed_csp2_19ft_2_scaffold_5659_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6775..8370
DNA (1596bp) protein (532aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036005F0
preprotein translocase, SecY subunit
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_19ft_2_scaffold_5659_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(8507..9436)
DNA (930bp) protein (310aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TBN5_ACIB4
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_19ft_2_scaffold_5659_17
unknown

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9610..9810
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 17 items

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