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RifSed_csp2_19ft_3_scaffold_8086

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_8086_1
MPI_TA06_32_111, Bacteria

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88..558
DNA (471bp) protein (157aa)
Glycosyl transferase group 1 id=2921096 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
glycosyltransferase
Tax=MPI_TA06_32_111
RifSed_csp2_19ft_3_scaffold_8086_2
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

542..1237
DNA (696bp) protein (232aa)
DNA-(apurinic or apyrimidinic site) lyase/Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) id=14424195 bin=bin11_novelCP species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=bin11_novelCP organism_group=Unknown_CP
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Tax=RBG_13_OP11_40_7b_curated
RifSed_csp2_19ft_3_scaffold_8086_3
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

Not on your lists

1290..2351
DNA (1062bp) protein (354aa)
recF; recombination protein F; K03629 DNA replication and repair protein RecF id=5084617 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
DNA replication and repair protein RecF
Tax=RBG_19FT_COMBO_OP11_39_10_curated
RifSed_csp2_19ft_3_scaffold_8086_4
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

2416..3465
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C3J7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
RifSed_csp2_19ft_3_scaffold_8086_5
unknown

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3473..3682
DNA (210bp) protein (70aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_8086_6

Not on your lists

3715..5520
DNA (1806bp) protein (602aa)
thermostable DNA ligase (EC:6.5.1.1)
Probable DNA ligase id=2565847 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Putative DNA ligase {ECO:0000313|EMBL:KKW25110.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
RifSed_csp2_19ft_3_scaffold_8086_7
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5517..6470
DNA (954bp) protein (318aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z4X3_9BACT id=51945 bin=ACD40 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
Na+/Ca+ antiporter, CaCA family
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
RifSed_csp2_19ft_3_scaffold_8086_8
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

Not on your lists

6476..7726
DNA (1251bp) protein (417aa)
UvrD/REP helicase id=5084629 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
PHP domain-containing protein
Tax=RBG_19FT_COMBO_OP11_39_10_curated
RifSed_csp2_19ft_3_scaffold_8086_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

7769..8392
DNA (624bp) protein (208aa)
Phosphoribosyltransferase n=1 Tax=Halogranum salarium B-1 RepID=J2ZVU4_9EURY
phosphoribosyltransferase
Tax=RBG_16_Thaumarchaeota_49_8_curated
RifSed_csp2_19ft_3_scaffold_8086_10
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

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8389..8946
DNA (558bp) protein (186aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=14632272 bin=bin9_gal15 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
RifSed_csp2_19ft_3_scaffold_8086_11
CG_CPR15_01, CG_CPR15, Bacteria

Not on your lists

8933..9421
DNA (489bp) protein (163aa)
Putative uncharacterized protein id=4209248 bin=GWF2_CPR3_35_18 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF2_CPR3_35_18 organism_group=CPR3
hypothetical protein
Tax=CG_CPR15_01
RifSed_csp2_19ft_3_scaffold_8086_12
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

9426..9713
DNA (288bp) protein (96aa)
Acylphosphatase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5ECP8_AMICL
acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:ADE56330.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
RifSed_csp2_19ft_3_scaffold_8086_13
unknown

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9710..10288
DNA (579bp) protein (193aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_8086_14
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10285..10755
DNA (471bp) protein (157aa)
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
RifSed_csp2_19ft_3_scaffold_8086_15
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

10931..11317
DNA (387bp) protein (129aa)
DNA-binding response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=35467 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_13_OP11_40_7b_curated
RifSed_csp2_19ft_3_scaffold_8086_16
GWA1_OP11_33_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

11371..11907
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E879_9BACT
hypothetical protein
Tax=GWA1_OP11_33_30
RifSed_csp2_19ft_3_scaffold_8086_17
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11919..12464
DNA (546bp) protein (182aa)
Thioredoxin n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZF6_THEOJ
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
RifSed_csp2_19ft_3_scaffold_8086_18
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

12498..13754
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036F9CCB
Glutamate dehydrogenase {ECO:0000313|EMBL:KKW15954.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
glutamate dehydrogenase
RifSed_csp2_19ft_3_scaffold_8086_19
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13732..14232
DNA (501bp) protein (167aa)
tagD; glycerol-3-phosphate cytidyltransferase TagD id=5084450 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
rfaE; bifunctional ADP-L-glycero-D-manno-heptose synthase: kinase (N-terminal); sugar nucleotide transferase (C-terminal)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
RifSed_csp2_19ft_3_scaffold_8086_20
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

14280..15020
DNA (741bp) protein (247aa)
GlcNAc-PI de-N-acetylase n=1 Tax=Laceyella sacchari RepID=UPI0003B6BAB3
LmbE family protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
RifSed_csp2_19ft_3_scaffold_8086_21
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

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15087..15785
DNA (699bp) protein (233aa)
DSBA-like thioredoxin domain protein n=2 Tax=Myxococcus RepID=Q1D7G6_MYXXD id=5086941 bin=GWF1_OP11_31_35_complete species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
DSBA oxidoreductase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
RifSed_csp2_19ft_3_scaffold_8086_22
unknown

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15782..16072
DNA (291bp) protein (97aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_8086_23
unknown

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16467..16859
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying 23 items

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