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ACD10_318

Alias: ACD10_70288.2446.10

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_318_1

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comp(2..370)
DNA (369bp) protein (123aa)
Recombination protein MgsA n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GI1_DECAR (db=UNIREF evalue=4.0e-57 bit_score=223.0 identity=86.99 coverage=99.1869918699187)
recombination factor protein RarA
WERNER HELICASE INTERACTING PROTEIN (db=HMMPanther db_id=PTHR13779:SF1 from=1 to=109 evalue=5.5e-46)
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=1 to=109 evalue=5.5e-46)
ACD10_318_2

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comp(675..1019)
DNA (345bp) protein (115aa)
RNA polymerase sigma factor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47D27_DECAR (db=UNIREF evalue=5.0e-47 bit_score=189.0 identity=82.46 coverage=98.2608695652174)
RNA polymerase sigma factor RpoS
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=10 to=105 evalue=2.3e-19 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=34 to=109 evalue=1.8e-14 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD10_318_3

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1310..1450
DNA (141bp) protein (47aa)
1310..1450 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE16873.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_318_4

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comp(1639..1983)
DNA (345bp) protein (115aa)
Peptidoglycan-binding LysM:Peptidase M23B n=1 Tax=Dechloromonas aromatica RCB RepID=Q47D26_DECAR (db=UNIREF evalue=2.0e-54 bit_score=213.0 identity=90.18 coverage=96.5217391304348)
peptidoglycan-binding LysM:peptidase M23B
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=12 to=111 evalue=1.5e-38 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
Peptidase_M23 (db=HMMPfam db_id=PF01551 from=14 to=107 evalue=1.5e-29 interpro_id=IPR016047 interpro_description=Peptidase M23)
Displaying 4 items

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