Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase sigma factor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47D27_DECAR (db=UNIREF evalue=5.0e-47 bit_score=189.0 identity=82.46 coverage=98.2608695652174) | similarity |
UNIREF
DB: UNIREF |
82.46 | 98.26 | 189 | 5.00e-47 | dar:Daro_2521 |
RNA polymerase sigma factor RpoS | similarity |
KEGG
DB: KEGG |
83.3 | 114.0 | 188 | 8.10e-46 | dar:Daro_2521 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=10 to=105 evalue=2.3e-19 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.30e-19 | dar:Daro_2521 |
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=34 to=109 evalue=1.8e-14 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.80e-14 | dar:Daro_2521 |
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=48 to=101 evalue=1.4e-13 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-13 | dar:Daro_2521 |
Uncharacterized protein {ECO:0000313|EMBL:EKE16875.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
99.1 | 114.0 | 219 | 2.10e-54 | K2G0Z8_9BACT |