ggKbase home page

ACD10_318_2

Organism: ACD10

near complete RP 47 / 55 MC: 19 BSCG 44 / 51 MC: 10 ASCG 0 / 38
Location: comp(675..1019)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47D27_DECAR (db=UNIREF evalue=5.0e-47 bit_score=189.0 identity=82.46 coverage=98.2608695652174) similarity UNIREF
DB: UNIREF
  • Identity: 82.46
  • Coverage: 98.26
  • Bit_score: 189
  • Evalue 5.00e-47
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 8.10e-46
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=10 to=105 evalue=2.3e-19 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.30e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 345
TTGAACGAACACATCGCTTCACTGGATGCGCCGCTCGAGATCGACCCGAGCTTGAGCATGGCCGAGATGATCGCCGATGATGGCAATGGCGATCCGGAATCGCTCCTCCAATCGAGTGAAATTGGCCTTTTGTTGGATGACTGGCTGGCGCAGCTTTCGGAGCGGCAAAGGGTGGTTATTGAACGCCGCTATGGGCTCAATGGTGCCGATGTGGCGACACTGGATGTGATTGCCACTGATCTCGAGCTGACTCGTGAACGAGTTCGGCAGATTCAGATAGAGGGACTCGATCGGCTCCGCAAGATCATCAAGCGCGGTAATGTGACGCGGGATTCCCTGCTCTAG
PROTEIN sequence
Length: 115
LNEHIASLDAPLEIDPSLSMAEMIADDGNGDPESLLQSSEIGLLLDDWLAQLSERQRVVIERRYGLNGADVATLDVIATDLELTRERVRQIQIEGLDRLRKIIKRGNVTRDSLL*