Alias: ACD21_23833.20227.11
name | lists | location/seqs | annotations | notes |
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ACD21_31_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(11..448)
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integrase family protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=6 to=62 evalue=1.1e-12 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Phage_integrase (db=HMMPfam db_id=PF00589 from=6 to=53 evalue=8.6e-11 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=7 to=58 evalue=3.2e-08 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
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ACD21_31_2
uncultured bacterium, Bacteria
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Not on your lists |
672..1760
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probable RND efflux membrane fusion protein
HlyD family secretion protein n=1 Tax=Methylococcus capsulatus RepID=Q605Z0_METCA (db=UNIREF evalue=2.0e-52 bit_score=209.0 identity=38.22 coverage=85.9504132231405)
seg (db=Seg db_id=seg from=112 to=127)
RND_mfp: efflux transporter, RND family, MFP (db=HMMTigr db_id=TIGR01730 from=50 to=356 evalue=3.7e-71 interpro_id=IPR006143 interpro_description=Secretion protein HlyD GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Cellular Component: membrane (GO:0016020))
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ACD21_31_3
uncultured bacterium, Bacteria
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Not on your lists |
1768..4821
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RND multidrug efflux transporter
RND multidrug efflux transporter
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=6 Tax=Coxiella burnetii RepID=A9NDH9_COXBR (db=UNIREF evalue=0.0 bit_score=876.0 identity=47.12 coverage=98.5265225933202)
transmembrane_regions (db=TMHMM db_id=tmhmm from=429 to=451)
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ACD21_31_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(4810..5808)
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pfkA; 6-phosphofructokinase (EC:2.7.1.11)
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=6 Tax=Coxiella burnetii RepID=K6PF_COXBU (db=UNIREF evalue=6.0e-85 bit_score=317.0 identity=51.56 coverage=95.4954954954955)
seg (db=Seg db_id=seg from=125 to=136)
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ACD21_31_5
uncultured bacterium, Bacteria
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Not on your lists |
6253..6555
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Rhs family protein-like protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3J9_9DELT (db=UNIREF evalue=7.0e-13 bit_score=76.3 identity=50.72 coverage=64.3564356435644)
RHS Repeat family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
SpvB (db=HMMPfam db_id=PF03534 from=36 to=91 evalue=5.9e-07)
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ACD21_31_6
uncultured bacterium, Bacteria
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Not on your lists |
6525..6749
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Rhs family protein {ECO:0000313|EMBL:EKE01474.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIB5_9BRAD
hypothetical protein
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ACD21_31_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(6723..10205)
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Transcription-repair coupling protein Mfd n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YHC3_9GAMM (db=UNIREF evalue=0.0 bit_score=1268.0 identity=54.07 coverage=98.0189491817399)
mfd; transcription-repair coupling factor
mfd; transcription-repair coupling factor
seg (db=Seg db_id=seg from=27 to=38)
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ACD21_31_8
uncultured bacterium, Bacteria
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Not on your lists |
10262..11002
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transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=221)
transmembrane_regions (db=TMHMM db_id=tmhmm from=172 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
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ACD21_31_9
uncultured bacterium, Bacteria
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Not on your lists |
11038..11757
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transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=135 to=157)
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ACD21_31_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(11803..12882)
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tRNA-specific 2-thiouridylase mnmA n=1 Tax=Beggiatoa sp. PS RepID=A7C2J1_9GAMM (db=UNIREF evalue=5.0e-126 bit_score=454.0 identity=60.51 coverage=97.2222222222222)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
trmU: tRNA (5-methylaminomethyl-2-thiouridyl (db=HMMTigr db_id=TIGR00420 from=6 to=358 evalue=2.9e-173 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
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ACD21_31_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(12944..13192)
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Translation initiation factor IF-1 n=6 Tax=Coxiella burnetii RepID=IF1_COXBN (db=UNIREF evalue=2.0e-27 bit_score=124.0 identity=69.51 coverage=95.1807228915663)
infA; translation initiation factor IF-1
infA: translation initiation factor IF-1 (db=HMMTigr db_id=TIGR00008 from=3 to=71 evalue=1.5e-41 interpro_id=IPR004368 interpro_description=Translation initiation factor IF-1 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=71 evalue=5.7e-29 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
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ACD21_31_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(13341..13808)
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protein-export protein SecB
SecB (db=HMMPfam db_id=PF02556 from=11 to=154 evalue=2.3e-56 interpro_id=IPR003708 interpro_description=Bacterial protein export chaperone SecB GO=Biological Process: protein transport (GO:0015031), Molecular Function: unfolded protein binding (GO:0051082), Biological Process: protein tetramerization (GO:0051262))
no description (db=Gene3D db_id=G3DSA:3.10.420.10 from=3 to=155 evalue=2.0e-54 interpro_id=IPR003708 interpro_description=Bacterial protein export chaperone SecB GO=Biological Process: protein transport (GO:0015031), Molecular Function: unfolded protein binding (GO:0051082), Biological Process: protein tetramerization (GO:0051262))
secB: protein-export chaperone SecB (db=HMMTigr db_id=TIGR00809 from=14 to=152 evalue=7.7e-52 interpro_id=IPR003708 interpro_description=Bacterial protein export chaperone SecB GO=Biological Process: protein transport (GO:0015031), Molecular Function: unfolded protein binding (GO:0051082), Biological Process: protein tetramerization (GO:0051262))
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ACD21_31_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(13809..14267)
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rhodanese domain-containing protein
seg (db=Seg db_id=seg from=15 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=17 to=142 evalue=3.9e-26 interpro_id=IPR001763 interpro_description=Rhodanese-like)
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ACD21_31_14
uncultured bacterium, Bacteria
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Not on your lists |
14459..16009
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2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Coxiella burnetii RepID=GPMI_COXBN (db=UNIREF evalue=0.0 bit_score=644.0 identity=59.92 coverage=98.2591876208897)
yibO; phosphoglyceromutase (EC:5.4.2.1)
yibO; phosphoglyceromutase (EC:5.4.2.1)
pgm_bpd_ind: 2,3-bisphosphoglycerate-inde (db=HMMTigr db_id=TIGR01307 from=7 to=513 evalue=8.9e-296 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
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ACD21_31_15
uncultured bacterium, Bacteria
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Not on your lists |
16029..17183
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peptidase M23/M37 domain-containing protein
seg (db=Seg db_id=seg from=165 to=178)
coiled-coil (db=Coil db_id=coil from=88 to=109 evalue=NA)
coiled-coil (db=Coil db_id=coil from=204 to=232 evalue=NA)
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ACD21_31_16
uncultured bacterium, Bacteria
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Not on your lists |
17214..18554
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ctpA; Carboxy-terminal-processing protease (EC:3.4.21.102)
ctpA; Carboxy-terminal-processing protease (EC:3.4.21.102)
Carboxy-terminal protease n=5 Tax=Legionella pneumophila RepID=D5T8Q9_LEGPN (db=UNIREF evalue=3.0e-107 bit_score=392.0 identity=49.53 coverage=93.5123042505593)
seg (db=Seg db_id=seg from=284 to=293)
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ACD21_31_17
uncultured bacterium, Bacteria
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Not on your lists |
comp(18571..19431)
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Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Pseudomonas mendocina ymp RepID=FOLD1_PSEMY (db=UNIREF evalue=3.0e-102 bit_score=374.0 identity=64.31 coverage=98.2578397212544)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
THF_DHG_CYH_1 (db=PatternScan db_id=PS00766 from=76 to=101 evalue=0.0 interpro_id=IPR020867 interpro_description=Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
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ACD21_31_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(19435..20127)
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Ribulose-phosphate 3-epimerase n=33 Tax=Yersinia RepID=D5AYL6_YERPZ (db=UNIREF evalue=5.0e-80 bit_score=300.0 identity=65.33 coverage=94.3722943722944)
rpe; Ribulose-phosphate 3-epimerase
rpe; Ribulose-phosphate 3-epimerase
RIBUL_P_3_EPIMER_2 (db=PatternScan db_id=PS01086 from=136 to=158 evalue=0.0 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
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