Alias: ACD23_60283.3200.13
name | lists | location/seqs | annotations | notes |
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ACD23_448_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1..126
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rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=4 Tax=Acidovorax RepID=RPOZ_ACIAC (db=UNIREF evalue=1.0e-14 bit_score=81.6 identity=95.12 coverage=95.2380952380952)
RNA_pol_Rpb6 (db=HMMPfam db_id=PF01192 from=1 to=34 evalue=1.8e-05 interpro_id=IPR006110 interpro_description=RNA polymerase Rpb6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
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rpoB detected but too short for phylogenetic analyses
kelly wrighton
(11/15/12)
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ACD23_448_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
415..2565
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(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T349_ACIDE (db=UNIREF evalue=0.0 bit_score=1427.0 identity=95.95 coverage=98.047419804742)
(p)ppGpp synthetase I SpoT/RelA
(p)ppGpp synthetase I SpoT/RelA
seg (db=Seg db_id=seg from=214 to=225)
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ACD23_448_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(2600..3172)
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transcription elongation factor GreB
coiled-coil (db=Coil db_id=coil from=79 to=100 evalue=NA)
GREAB_1 (db=PatternScan db_id=PS00829 from=41 to=72 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
greB: transcription elongation factor GreB (db=HMMTigr db_id=TIGR01461 from=26 to=182 evalue=7.9e-78 interpro_id=IPR006358 interpro_description=Transcription elongation factor GreB GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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