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ACD29_28

Alias: ACD29_255169.6231.5

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
ACD29_28_1

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comp(2..868)
-----------------
DNA (867bp)
protein (289aa)
2..868 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
ACD29_28_2

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comp(853..1077)
-----------------
DNA (225bp)
protein (75aa)
853..1077 - (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
ACD29_28_3

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comp(1077..1277)
-----------------
DNA (201bp)
protein (67aa)
1077..1277 - (rbs_motif=GGA/GAG/AGG rbs_spacer=11-12bp)
ACD29_28_4

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1389..2390
-----------------
DNA (1002bp)
protein (334aa)
TIM-barrel protein, yjbN family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2X0_9GAMM (db=UNIREF evalue=7.0e-101 bit_score=370.0 identity=57.0 coverage=91.3173652694611)
TIM-barrel protein, yjbN family
TIM-barrel protein, yjbN family
yjbN: tRNA dihydrouridine synthase A (db=HMMTigr db_id=TIGR00742 from=19 to=331 evalue=1.2e-164 interpro_id=IPR004653 interpro_description=tRNA-dihydrouridine synthase, TIM-barrel, YjbN GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
ACD29_28_5

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comp(2372..3199)
-----------------
DNA (828bp)
protein (276aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5BVY7_NITHN (db=UNIREF evalue=1.0e-71 bit_score=273.0 identity=44.78 coverage=96.0144927536232)
hypothetical protein
DUF830 (db=HMMPfam db_id=PF05708 from=38 to=194 evalue=1.0e-07)
ACD29_28_6

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comp(3213..4583)
-----------------
DNA (1371bp)
protein (457aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=6 Tax=Coxiella burnetii RepID=A9KFH8_COXBN (db=UNIREF evalue=7.0e-147 bit_score=524.0 identity=58.81 coverage=99.1247264770241)
seg (db=Seg db_id=seg from=77 to=87)
ACD29_28_7

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5097..5783
-----------------
DNA (687bp)
protein (229aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTF8_PSEMY (db=UNIREF evalue=7.0e-69 bit_score=263.0 identity=57.4 coverage=95.1965065502183)
DegT/DnrJ/EryC1/StrS aminotransferase
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=227 evalue=6.1e-61 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
DegT_DnrJ_EryC1 (db=HMMPfam db_id=PF01041 from=1 to=223 evalue=1.8e-60 interpro_id=IPR000653 interpro_description=DegT/DnrJ/EryC1/StrS aminotransferase)
ACD29_28_8

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6101..6265
-----------------
DNA (165bp)
protein (55aa)
3-hydroxyacyl CoA dehydrogenase n=6 Tax=Coxiella burnetii RepID=B6J0L0_COXB2 (db=UNIREF evalue=8.0e-15 bit_score=82.8 identity=63.64 coverage=98.1818181818182)
3-hydroxyacyl CoA dehydrogenase (EC:1.1.1.35)
3-HYDROXYACYL-COA DEHYDROGENASE TYPE II (db=HMMPanther db_id=PTHR19410:SF78 from=1 to=55 evalue=2.8e-19)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=1 to=55 evalue=2.8e-19 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
Displaying 8 items

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