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ACD34_219

Alias: ACD34_165786.3033.8

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD34_219_1
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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3..308
DNA (306bp) protein (102aa)
Sigma70_r4_2 (db=HMMPfam db_id=PF08281 from=2 to=46 evalue=1.2e-10 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=1 to=52 evalue=1.2e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=58 to=95 evalue=1.9e-05 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma70_r4_2 (db=HMMPfam db_id=PF08281 from=58 to=90 evalue=6.1e-05 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD34_219_2

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305..2563
DNA (2259bp) protein (753aa)
hypothetical protein
seg (db=Seg db_id=seg from=31 to=43)
seg (db=Seg db_id=seg from=513 to=528)
seg (db=Seg db_id=seg from=404 to=410)
ACD34_219_3

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comp(2647..3066)
DNA (420bp) protein (140aa)
ATP-dependent Clp protease ATP-binding subunit ClpC
seg (db=Seg db_id=seg from=110 to=138)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
ClpB_D2-small (db=HMMPfam db_id=PF10431 from=26 to=110 evalue=1.4e-26 interpro_id=IPR019489 interpro_description=Clp ATPase, C-terminal)
Displaying 3 items

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