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ACD46_119

Alias: ACD46_55660.9448.9

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD46_119_1

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2..613
DNA (612bp) protein (204aa)
DNA primase
DNA primase n=3 Tax=Aliivibrio RepID=B5FB85_VIBFM (db=UNIREF evalue=3.0e-11 bit_score=71.6 identity=30.32 coverage=88.7254901960784)
seg (db=Seg db_id=seg from=65 to=78)
seg (db=Seg db_id=seg from=187 to=201)
ACD46_119_2

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1038..2639
DNA (1602bp) protein (534aa)
RNA polymerase sigma factor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPV7_THISH (db=UNIREF evalue=0.0 bit_score=689.0 identity=66.86 coverage=98.12734082397)
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma-70 subunit RpoD
seg (db=Seg db_id=seg from=87 to=98)
ACD46_119_3

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2694..3437
DNA (744bp) protein (248aa)
2694..3437 + (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD70452.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_119_4

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3459..4271
DNA (813bp) protein (271aa)
3459..4271 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD70453.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_119_5

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4800..4967
DNA (168bp) protein (56aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD70454.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_119_6

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5191..5952
DNA (762bp) protein (254aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Rickettsiella grylli RepID=A8PKH7_9COXI (db=UNIREF evalue=1.0e-80 bit_score=303.0 identity=55.91 coverage=99.2125984251969)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
GSH_gloB: hydroxyacylglutathione hydrolase (db=HMMTigr db_id=TIGR03413 from=3 to=253 evalue=2.0e-143 interpro_id=IPR017782 interpro_description=Hydroxyacylglutathione hydrolase GO=Molecular Function: hydroxyacylglutathione hydrolase activity (GO:0004416), Molecular Function: zinc ion binding (GO:0008270))
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=1 to=253 evalue=2.7e-82)
ACD46_119_7

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6024..6401
DNA (378bp) protein (126aa)
seg (db=Seg db_id=seg from=13 to=24)
seg (db=Seg db_id=seg from=78 to=90)
Uncharacterized protein {ECO:0000313|EMBL:EKD70456.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_119_8

Not on your lists

6491..6892
DNA (402bp) protein (134aa)
6491..6892 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD70457.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_119_9

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7072..7347
DNA (276bp) protein (92aa)
DUF1543 (db=HMMPfam db_id=PF07566 from=20 to=69 evalue=1.1e-09 interpro_id=IPR011440 interpro_description=Protein of unknown function DUF1543)
Uncharacterized protein {ECO:0000313|EMBL:EKD70458.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_119_10
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

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7356..8453
DNA (1098bp) protein (366aa)
hypothetical protein
seg (db=Seg db_id=seg from=233 to=247)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=35 to=364 evalue=4.3e-39 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
ACD46_119_11

Not on your lists

8501..9442
DNA (942bp) protein (314aa)
coiled-coil (db=Coil db_id=coil from=248 to=269 evalue=NA)
seg (db=Seg db_id=seg from=84 to=102)
seg (db=Seg db_id=seg from=287 to=306)
transmembrane_regions (db=TMHMM db_id=tmhmm from=285 to=307)
Displaying 11 items

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