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ACD4_25

Alias: ACD4_43506.6531.12

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_25_1
unknown

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1..771
DNA (771bp) protein (257aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNY3_9FIRM (db=UNIREF evalue=9.0e-16 bit_score=87.4 identity=29.67 coverage=78.988326848249)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein (db=KEGG evalue=6.0e-15 bit_score=84.7 identity=27.21 coverage=97.6653696498054)
coiled-coil (db=Coil db_id=coil from=7 to=28 evalue=NA)
coiled-coil (db=Coil db_id=coil from=65 to=86 evalue=NA)
ACD4_25_2

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786..1976
DNA (1191bp) protein (397aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=323 to=345)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
ACD4_25_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

2005..2691
DNA (687bp) protein (229aa)
yknY; ABC transporter
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=41 to=54 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=8 to=227 evalue=3.6e-84)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=8 to=227 evalue=3.6e-84)
ACD4_25_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

2776..3054
DNA (279bp) protein (93aa)
coiled-coil (db=Coil db_id=coil from=72 to=93 evalue=NA)
seg (db=Seg db_id=seg from=10 to=35)
coiled-coil 72..93 Tax=ACD4
ACD4_25_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

3066..3326
DNA (261bp) protein (87aa)
3066..3326 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_25_6

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comp(3343..3906)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSF2_9BACT (db=UNIREF evalue=3.0e-22 bit_score=107.0 identity=34.38 coverage=97.8723404255319)
seg (db=Seg db_id=seg from=52 to=66)
seg (db=Seg db_id=seg from=104 to=115)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=4 to=185 evalue=5.2e-17)
ACD4_25_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3911..4588)
DNA (678bp) protein (226aa)
Cell division ATP-binding protein FtsE n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF09_9ACTN (db=UNIREF evalue=1.0e-48 bit_score=196.0 identity=42.13 coverage=94.6902654867257)
ftsE3; Cell division ATP-binding protein FtsE
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=222 evalue=2.8e-73)
FILAMENTATION TEMPERATURE SENSITIVE CELL DIVISION PROTEIN FTSE (db=HMMPanther db_id=PTHR19222:SF36 from=1 to=222 evalue=2.8e-73)
ACD4_25_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

4725..5126
DNA (402bp) protein (134aa)
cyclic nucleotide-binding domain containing protein (db=KEGG evalue=5.0e-10 bit_score=66.2 identity=29.41 coverage=91.7910447761194)
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=3 to=127 evalue=7.1e-17 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=3 to=124 evalue=3.1e-13 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN (db=HMMPanther db_id=PTHR11635 from=3 to=98 evalue=3.2e-09)
ACD4_25_9
ACD4, Gracilibacteria, Bacteria

Not on your lists


5220..5483
DNA (264bp) protein (88aa)
30S ribosomal protein S15
30S ribosomal protein S15 n=2 Tax=Mesorhizobium RepID=RS15_RHILO (db=UNIREF evalue=4.0e-18 bit_score=93.6 identity=63.41 coverage=92.0454545454545)
seg (db=Seg db_id=seg from=60 to=71)
coiled-coil (db=Coil db_id=coil from=27 to=48 evalue=NA)
ACD4_25_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

5689..6567
DNA (879bp) protein (293aa)
murein transglycosylase
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=12 to=22)
Lysozyme-like (db=superfamily db_id=SSF53955 from=84 to=227 evalue=4.2e-23)
Displaying 10 items

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