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ACD15_39

Alias: ACD15_13018.53448.16

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_39_1

Not on your lists

comp(58..963)
DNA (906bp) protein (302aa)
HemK family modification methylase
seg (db=Seg db_id=seg from=153 to=167)
coiled-coil (db=Coil db_id=coil from=238 to=259 evalue=NA)
RF_mod_PrmC: protein-(glutamine-N5) methy (db=HMMTigr db_id=TIGR03534 from=20 to=298 evalue=2.7e-71 interpro_id=IPR019874 interpro_description=Protein-(glutamine-N5) methyltransferase, release factor-specific)
ACD15_39_2

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1127..1765
DNA (639bp) protein (213aa)
G-D-S-L family lipolytic protein
SGNH hydrolase (db=superfamily db_id=SSF52266 from=3 to=212 evalue=1.3e-21 interpro_id=IPR013830 interpro_description=Esterase, SGNH hydrolase-type)
no description (db=Gene3D db_id=G3DSA:3.40.50.1110 from=5 to=212 evalue=6.1e-11 interpro_id=IPR013831 interpro_description=Esterase, SGNH hydrolase-type, subgroup GO=Molecular Function: hydrolase activity (GO:0016787))
Lipase_GDSL (db=HMMPfam db_id=PF00657 from=6 to=178 evalue=5.2e-06 interpro_id=IPR001087 interpro_description=Lipase, GDSL GO=Biological Process: lipid metabolic process (GO:0006629), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD15_39_3

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1808..2089
DNA (282bp) protein (94aa)
1808..2089 + (rbs_motif=AACAA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11784.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_39_4

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2108..2695
DNA (588bp) protein (196aa)
hypothetical protein
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=195 evalue=8.9e-36)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR23200 from=42 to=193 evalue=1.1e-21)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR23200:SF10 from=42 to=193 evalue=1.1e-21)
ACD15_39_5

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2740..3435
DNA (696bp) protein (232aa)
methyltransferase type 11
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=203 evalue=3.4e-30)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=43 to=136 evalue=4.6e-26)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=48 to=136 evalue=2.6e-21 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD15_39_6

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3544..4155
DNA (612bp) protein (204aa)
3544..4155 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_39_7

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4240..4842
DNA (603bp) protein (201aa)
putative HD domain protein
HD (db=HMMPfam db_id=PF01966 from=24 to=120 evalue=7.1e-07 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=23 to=178 evalue=8.2e-06)
HDIG: uncharacterized domain HDIG (db=HMMTigr db_id=TIGR00277 from=17 to=116 evalue=0.0025 interpro_id=IPR006675 interpro_description=Uncharacterised protein family HDIG)
ACD15_39_8

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5058..5789
DNA (732bp) protein (244aa)
amidohydrolase 2
Amidohydrolase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B0Q1_9BACI (db=UNIREF evalue=5.0e-22 bit_score=107.0 identity=33.5 coverage=75.4098360655738)
Amidohydro_2 (db=HMMPfam db_id=PF04909 from=69 to=231 evalue=4.5e-25 interpro_id=IPR006992 interpro_description=Amidohydrolase 2 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=1 to=229 evalue=1.7e-24)
ACD15_39_9

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5959..6474
DNA (516bp) protein (172aa)
hypothetical protein (db=KEGG evalue=2.0e-14 bit_score=81.6 identity=39.42 coverage=58.7209302325581)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=36)
seg (db=Seg db_id=seg from=17 to=31)
Gmad2 (db=HMMPfam db_id=PF10648 from=68 to=154 evalue=3.9e-10 interpro_id=IPR018911 interpro_description=Spore germination protein-like Gmad2, bacteria)
ACD15_39_10

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6611..7726
DNA (1116bp) protein (372aa)
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAR2_9BACT (db=UNIREF evalue=2.0e-53 bit_score=213.0 identity=33.42 coverage=96.7741935483871)
seg (db=Seg db_id=seg from=114 to=125)
seg (db=Seg db_id=seg from=87 to=98)
ACD15_39_11

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7742..8020
DNA (279bp) protein (93aa)
7742..8020 + (rbs_motif=AATA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11792.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_39_12

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comp(8041..11568)
DNA (3528bp) protein (1176aa)
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W253_DESAS (db=UNIREF evalue=0.0 bit_score=1000.0 identity=48.47 coverage=89.7959183673469)
seg (db=Seg db_id=seg from=436 to=447)
ACD15_39_13

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11957..12619
DNA (663bp) protein (221aa)
DNA replication and repair protein RadC
UPF0758 (db=PatternScan db_id=PS01302 from=169 to=174 evalue=0.0 interpro_id=IPR020891 interpro_description=Uncharacterised protein family, RadC-like, conserved site)
radc: DNA repair protein RadC (db=HMMTigr db_id=TIGR00608 from=11 to=220 evalue=2.5e-72 interpro_id=IPR001405 interpro_description=Uncharacterised protein family, RadC-like)
DUF2466 (db=HMMPfam db_id=PF04002 from=101 to=220 evalue=1.2e-41 interpro_id=IPR001405 interpro_description=Uncharacterised protein family, RadC-like)
ACD15_39_14

Not on your lists

12668..13393
DNA (726bp) protein (242aa)
N-6 DNA methylase (db=KEGG evalue=4.0e-08 bit_score=62.0 identity=27.01 coverage=69.4214876033058)
PhdYeFM (db=HMMPfam db_id=PF02604 from=5 to=53 evalue=1.2e-10 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
YefM-like (db=superfamily db_id=SSF143120 from=4 to=53 evalue=4.1e-09)
phd_fam: prevent-host-death family protein (db=HMMTigr db_id=TIGR01552 from=6 to=59 evalue=3.0e-05 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
ACD15_39_15

Not on your lists

13424..14122
DNA (699bp) protein (233aa)
ribonuclease h (EC:3.1.26.4)
seg (db=Seg db_id=seg from=163 to=175)
seg (db=Seg db_id=seg from=28 to=44)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=9 to=230 evalue=7.9e-60 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD15_39_16

Not on your lists


14180..14386
DNA (207bp) protein (69aa)
seg (db=Seg db_id=seg from=59 to=68)
Ribosomal_L32p (db=HMMPfam db_id=PF01783 from=4 to=56 evalue=2.1e-15 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=2 to=57 evalue=4.7e-15 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmF_bact: ribosomal protein L32 (db=HMMTigr db_id=TIGR01031 from=4 to=56 evalue=7.4e-15 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD15_39_17

Not on your lists

14492..14989
DNA (498bp) protein (166aa)
putative transcription termination factor
seg (db=Seg db_id=seg from=148 to=164)
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=3 to=138 evalue=8.9e-53 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353))
NusB (db=HMMPfam db_id=PF01029 from=7 to=136 evalue=1.2e-36 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD15_39_18

Not on your lists

15141..15830
DNA (690bp) protein (230aa)
Ribonuclease 3
RNASE_3_1 (db=PatternScan db_id=PS00517 from=41 to=49 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
RNaseIII: ribonuclease III (db=HMMTigr db_id=TIGR02191 from=5 to=227 evalue=1.5e-88 interpro_id=IPR011907 interpro_description=Ribonuclease III, bacterial GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: rRNA catabolic process (GO:0016075))
RIBONUCLEASE III (db=HMMPanther db_id=PTHR11207 from=1 to=229 evalue=1.6e-71)
ACD15_39_19

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comp(15682..16206)
DNA (525bp) protein (175aa)
seg (db=Seg db_id=seg from=83 to=90)
seg (db=Seg db_id=seg from=139 to=153)
Uncharacterized protein {ECO:0000313|EMBL:EKE11800.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_39_20

Not on your lists

17223..18623
DNA (1401bp) protein (467aa)
seg (db=Seg db_id=seg from=446 to=457)
coiled-coil (db=Coil db_id=coil from=207 to=235 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE11752.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_39_21

Not on your lists

18713..20623
DNA (1911bp) protein (637aa)
seg (db=Seg db_id=seg from=524 to=540)
seg (db=Seg db_id=seg from=329 to=346)
seg (db=Seg db_id=seg from=207 to=219)
seg (db=Seg db_id=seg from=172 to=190)
ACD15_39_22

Not on your lists

20648..20953
DNA (306bp) protein (102aa)
coiled-coil (db=Coil db_id=coil from=13 to=34 evalue=NA)
coiled-coil (db=Coil db_id=coil from=45 to=73 evalue=NA)
seg (db=Seg db_id=seg from=85 to=98)
Uncharacterized protein {ECO:0000313|EMBL:EKE11754.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_39_23

Not on your lists

20975..23338
DNA (2364bp) protein (788aa)
smc; chromosome segregation protein SMC
Chromosome segregation protein SMC n=1 Tax=Turicibacter sp. PC909 RepID=D4W362_9FIRM (db=UNIREF evalue=3.0e-65 bit_score=254.0 identity=51.25 coverage=29.3147208121827)
coiled-coil (db=Coil db_id=coil from=520 to=548 evalue=NA)
coiled-coil (db=Coil db_id=coil from=421 to=456 evalue=NA)
ACD15_39_24

Not on your lists

23365..24039
DNA (675bp) protein (225aa)
hypothetical protein
seg (db=Seg db_id=seg from=104 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
ACD15_39_25

Not on your lists


24183..24470
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=64 to=95)
30S RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919 from=11 to=85 evalue=2.5e-12 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S16 (db=superfamily db_id=SSF54565 from=11 to=61 evalue=2.0e-09 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S16 (db=HMMPfam db_id=PF00886 from=10 to=45 evalue=5.6e-08 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD15_39_26

Not on your lists


24644..25159
DNA (516bp) protein (172aa)
50S ribosomal protein L10
seg (db=Seg db_id=seg from=90 to=100)
seg (db=Seg db_id=seg from=124 to=138)
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=3 to=100 evalue=5.8e-23 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
ACD15_39_27

Not on your lists


25241..25642
DNA (402bp) protein (134aa)
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LTX3_9FIRM (db=UNIREF evalue=2.0e-28 bit_score=128.0 identity=73.11 coverage=88.0597014925373)
seg (db=Seg db_id=seg from=44 to=63)
L12: ribosomal protein L7/L12 (db=HMMTigr db_id=TIGR00855 from=12 to=133 evalue=7.5e-57 interpro_id=IPR000206 interpro_description=Ribosomal protein L7/L12 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD15_39_28

Not on your lists

25781..26551
DNA (771bp) protein (257aa)
glycosyltransferase
seg (db=Seg db_id=seg from=221 to=233)
seg (db=Seg db_id=seg from=59 to=73)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=25 to=226 evalue=8.1e-33)
ACD15_39_29

Not on your lists

26578..27594
DNA (1017bp) protein (339aa)
galactose-1-phosphate uridylyltransferase
Galactose-1-phosphate uridylyltransferase (db=HMMPIR db_id=PIRSF000808 from=1 to=338 evalue=1.0e-71 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR11943 from=13 to=338 evalue=1.0e-57 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
HIT-like (db=superfamily db_id=SSF54197 from=12 to=182 evalue=4.5e-39 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
ACD15_39_30

Not on your lists

27698..28465
DNA (768bp) protein (256aa)
triosephosphate isomerase (EC:5.3.1.1)
TIM_1 (db=PatternScan db_id=PS00171 from=166 to=176 evalue=0.0 interpro_id=IPR020861 interpro_description=Triosephosphate isomerase, active site)
TRIOSEPHOSPHATE ISOMERASE (db=HMMPanther db_id=PTHR21139 from=1 to=252 evalue=2.9e-84 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
TIM (db=HMMPfam db_id=PF00121 from=3 to=248 evalue=7.9e-81 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
Displaying items 1-30 of 55 in total

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