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ACDOP11_29

Alias: ACDOP11_207822.8822.6

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_29_1
OP11_GWA2_32_13, Roizmanbacteria, Microgenomates, Bacteria

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comp(1..141)
DNA (141bp) protein (47aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=10 to=27)
Putative uncharacterized protein Tax=OP11_GWA2_32_13
hypothetical protein
ACDOP11_29_2
ACD22, ACD22, ACD22, ACD22, WWE3, Bacteria

Not on your lists

comp(459..974)
DNA (516bp) protein (172aa)
putative sodium/calcium exchanger protein; K07301 (db=KEGG evalue=3.0e-17 bit_score=90.9 identity=43.24 coverage=63.953488372093)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
seg (db=Seg db_id=seg from=156 to=167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
ACDOP11_29_3
ACD22, ACD22, ACD22, ACD22, WWE3, Bacteria

Not on your lists

comp(1150..1422)
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=77 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=65)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACDOP11_29_4
R_RIF_OP11_03_48_12, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(1573..1737)
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=18 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=53)
EamA (db=HMMPfam db_id=PF00892 from=4 to=50 evalue=1.2e-06 interpro_id=IPR000620 interpro_description=Protein of unknown function DUF6, transmembrane GO=Cellular Component: membrane (GO:0016020))
ACDOP11_29_5
R_OP11_Gottesmanbacteria_49_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1724..2476)
DNA (753bp) protein (251aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=204)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
ACDOP11_29_6

Not on your lists

comp(2506..3156)
DNA (651bp) protein (217aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE05650.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ere:EUBREC_3442 hypothetical protein alias=ACD48_C00091G00001,ACD48_527275.7836.5G0001,ACD48_527275.7836.5_1 id=67282 tax=ACD48 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes organism_group=OP11 organism_desc=OP11
ACDOP11_29_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3669..4265)
DNA (597bp) protein (199aa)
hypothetical protein
seg (db=Seg db_id=seg from=6 to=20)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z3M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92636.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
ACDOP11_29_8
unknown

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comp(4262..4381)
DNA (120bp) protein (40aa)

This feature has no annotations

ACDOP11_29_9
unknown

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comp(4602..5192)
DNA (591bp) protein (197aa)
seg (db=Seg db_id=seg from=23 to=48)
ACDOP11_29_10

Not on your lists

comp(5428..5643)
DNA (216bp) protein (72aa)
transcription regulator, Cro/CI family -related protein; K07727 putative transcriptional regulator (db=KEGG evalue=1.0e-30 bit_score=134.0 identity=91.55 coverage=97.2222222222222)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=65 evalue=6.4e-11 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=6 to=62 evalue=0.00025 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=7 to=62 evalue=10.484 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACDOP11_29_11

Not on your lists

comp(5706..6548)
DNA (843bp) protein (281aa)
aminoglycoside phosphotransferase
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=1 to=233 evalue=4.5e-25 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
APH (db=HMMPfam db_id=PF01636 from=23 to=237 evalue=4.0e-18 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
no description (db=Gene3D db_id=G3DSA:3.90.1200.10 from=29 to=236 evalue=7.9e-15)
ACDOP11_29_12
ACD38, ACD38, ACD38, ACD38, Microgenomates, Bacteria

Not on your lists

comp(6615..7184)
DNA (570bp) protein (190aa)
hypothetical protein (db=KEGG evalue=2.0e-19 bit_score=98.2 identity=31.58 coverage=98.9473684210526)
seg (db=Seg db_id=seg from=109 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=161 to=183)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=123)
ACDOP11_29_13
unknown

Not on your lists

comp(7532..7882)
DNA (351bp) protein (117aa)
seg (db=Seg db_id=seg from=74 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
ACDOP11_29_14
unknown

Not on your lists

comp(8083..8196)
DNA (114bp) protein (38aa)

This feature has no annotations

ACDOP11_29_15
unknown

Not on your lists

comp(8225..8467)
DNA (243bp) protein (81aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=53)
seg (db=Seg db_id=seg from=62 to=75)
ACDOP11_29_16
unknown

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comp(8562..8741)
DNA (180bp) protein (60aa)

This feature has no annotations

ACDOP11_29_17
unknown

Not on your lists

comp(8790..8855)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 17 items

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