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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 51-100 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_44 ACD18_3480.5304.5
Species: uncultured bacterium (100%)
7 5338 bp 30.74 1.00 96.16
done Jill Banfield (11/15/12)
ACD18_51 ACD18_3123.4790.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 4836 bp 31.12 1.00 94.73
done Jill Banfield (11/15/12)
ACD18_56 ACD18_8207.6123.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 6163 bp 30.52 1.00 92.73
done Jill Banfield (11/15/12)
ACD18_115 ACD18_67308.7508.5
Species: uncultured bacterium (85.71%)
7 7542 bp 31.65 1.00 94.03
done Jill Banfield (11/15/12)
ACD18_118 ACD18_1610.4648.22
Species: uncultured bacterium (71.43%)
7 4694 bp 28.38 1.00 94.40
done Jill Banfield (11/15/12)
ACD18_135 ACD18_111108.4419.5
Species: uncultured bacterium (57.14%)
7 4453 bp 31.30 1.00 94.18
done Jill Banfield (11/15/12)
ACD18_140 ACD18_176426.5817.6
Species: uncultured bacterium (57.14%)
7 5851 bp 27.14 1.00 96.70
done Jill Banfield (11/15/12)
ACD18_178 ACD18_208343.2919.5
Species: uncultured bacterium (100%)
7 2953 bp 32.07 1.00 77.62
done Jill Banfield (11/15/12)
ACD18_6 ACD18_217025.5997.5
Species: uncultured bacterium (100%)
7 6031 bp 32.37 1.00 64.12
done Jill Banfield (11/15/12)
ACD18_7 ACD18_899.4660.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
7 4706 bp 31.43 1.00 81.98
done Jill Banfield (11/15/12)
ACD18_15 ACD18_3062.4996.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 5042 bp 30.35 1.00 92.70
done Jill Banfield (11/15/12)
ACD18_33 ACD18_1774.4492.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4532 bp 30.91 1.00 95.19
done Jill Banfield (11/15/12)
ACD18_40 ACD18_241.4324.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4370 bp 31.24 1.00 84.99
done Jill Banfield (11/15/12)
ACD18_66 ACD18_23735.4126.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4166 bp 31.57 1.00 98.58
done Jill Banfield (11/15/12)
ACD18_70 ACD18_12940.6192.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 6232 bp 33.01 1.00 79.19
done Jill Banfield (11/15/12)
ACD18_75 ACD18_1838.8437.22
Species: uncultured bacterium (100%)
6 8477 bp 32.48 1.00 85.11
done Jill Banfield (11/15/12)
ACD18_78 ACD18_580.6818.23
Species: uncultured bacterium (100%)
6 6858 bp 31.58 1.00 93.48
done Jill Banfield (11/15/12)
ACD18_81 ACD18_237766.4003.4
Species: uncultured bacterium (50%)
6 4037 bp 29.95 1.00 77.51
done Jill Banfield (11/15/12)
ACD18_82 ACD18_7063.5958.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 5998 bp 31.61 1.00 87.08
done Jill Banfield (11/15/12)
ACD18_93 ACD18_6434.5280.22
Species: uncultured bacterium (50%)
6 5320 bp 28.80 1.00 82.39
done Jill Banfield (11/15/12)
ACD18_99 ACD18_82084.4148.5
Species: uncultured bacterium (83.33%)
6 4182 bp 27.52 1.00 78.48
done Jill Banfield (11/15/12)
ACD18_107 ACD18_232411.3474.6
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 3508 bp 29.62 1.00 83.30
done Jill Banfield (11/15/12)
ACD18_110 ACD18_1193.5388.23
Species: uncultured bacterium (50%)
6 5428 bp 31.41 1.00 98.43
done Jill Banfield (11/15/12)
ACD18_128 ACD18_10851.6655.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 6695 bp 32.49 1.00 91.05
done Jill Banfield (11/15/12)
ACD18_149 ACD18_2975.4908.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4954 bp 31.91 1.00 86.66
done Jill Banfield (11/15/12)
ACD18_167 ACD18_1180.5731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 5771 bp 34.69 1.00 95.29
done Jill Banfield (11/15/12)
ACD18_9 ACD18_16434.3624.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 3664 bp 31.25 1.00 73.77
done Jill Banfield (11/15/12)
ACD18_94 ACD18_3772.5116.20
Species: uncultured bacterium (60%)
5 5156 bp 34.91 1.00 72.50
done Jill Banfield (11/15/12)
ACD18_97 ACD18_2585.3696.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
5 3736 bp 33.86 1.00 88.57
done Jill Banfield (11/15/12)
ACD18_98 ACD18_1639.2740.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
5 2786 bp 29.50 1.00 83.78
done Jill Banfield (11/15/12)
ACD18_105 ACD18_384462.2299.4
Species: uncultured bacterium (80%)
5 2333 bp 33.26 1.00 89.24
done Jill Banfield (11/15/12)
ACD18_117 ACD18_1038.5864.24
Species: uncultured bacterium (80%)
5 5904 bp 30.74 1.00 83.38
done Jill Banfield (11/15/12)
ACD18_121 ACD18_2351.4237.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 4283 bp 33.64 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_132 ACD18_1539.6751.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6797 bp 30.66 1.00 92.11
done Jill Banfield (11/15/12)
ACD18_133 ACD18_217180.3300.5
Species: uncultured bacterium (80%)
5 3334 bp 29.12 1.00 69.56
done Jill Banfield (11/15/12)
ACD18_136 ACD18_54037.2449.7
Species: uncultured bacterium (100%)
5 2483 bp 29.84 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_151 ACD18_811.3885.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3931 bp 28.62 1.00 69.22
done Jill Banfield (11/15/12)
ACD18_161 ACD18_1025.3163.22
Species: uncultured bacterium (80%)
5 3203 bp 32.63 1.00 82.70
done Jill Banfield (11/15/12)
ACD18_164 ACD18_233382.3131.6
Species: uncultured bacterium (100%)
5 3165 bp 29.57 1.00 77.82
done Jill Banfield (11/15/12)
ACD18_16 ACD18_1979.3067.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3113 bp 30.49 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_24 ACD18_118085.3572.5
Species: uncultured bacterium (100%)
5 3606 bp 30.48 1.00 88.94
done Jill Banfield (11/15/12)
ACD18_28 ACD18_544.6300.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6340 bp 28.58 1.00 57.82
done Jill Banfield (11/15/12)
ACD18_32 ACD18_24801.2867.5
Species: uncultured bacterium (100%)
4 2901 bp 33.44 1.00 98.45
done Jill Banfield (11/15/12)
ACD18_54 ACD18_230.4448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 4488 bp 30.79 1.00 95.05
done Jill Banfield (11/15/12)
ACD18_58 ACD18_1753.2742.23
Species: uncultured bacterium (75%)
4 2788 bp 30.24 1.00 98.35
done Jill Banfield (11/15/12)
ACD18_61 ACD18_101906.2675.5
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 2709 bp 34.37 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_62 ACD18_4449.4073.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 4113 bp 31.36 1.00 64.77
done Jill Banfield (11/15/12)
ACD18_63 ACD18_138274.2613.5
Species: uncultured bacterium (100%)
4 2647 bp 31.36 1.00 51.00
done Jill Banfield (11/15/12)
ACD18_67 ACD18_321.5596.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 5636 bp 33.16 1.00 85.33
done Jill Banfield (11/15/12)
ACD18_72 ACD18_61444.3138.6
Species: uncultured bacterium (100%)
4 3172 bp 29.26 1.00 95.43
done Jill Banfield (11/15/12)
Displaying items 51-100 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.