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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 51-100 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_178 ACD18_208343.2919.5
Species: uncultured bacterium (100%)
7 2953 bp 32.07 1.00 77.62
done Jill Banfield (11/15/12)
ACD18_87 ACD18_3491.2369.6
Species: uncultured bacterium (100%)
2 2403 bp 28.92 1.00 77.78
done Jill Banfield (11/15/12)
ACD18_164 ACD18_233382.3131.6
Species: uncultured bacterium (100%)
5 3165 bp 29.57 1.00 77.82
done Jill Banfield (11/15/12)
ACD18_172 ACD18_93916.2863.6
Species: uncultured bacterium (100%)
3 2897 bp 32.17 1.00 78.08
done Jill Banfield (11/15/12)
ACD18_25 ACD18_24595.2617.5
Species: uncultured bacterium (100%)
3 2651 bp 30.33 1.00 78.42
done Jill Banfield (11/15/12)
ACD18_48 ACD18_2326.9685.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (70%)
10 9731 bp 30.84 1.00 78.46
done Jill Banfield (11/15/12)
ACD18_99 ACD18_82084.4148.5
Species: uncultured bacterium (83.33%)
6 4182 bp 27.52 1.00 78.48
done Jill Banfield (11/15/12)
ACD18_14 ACD18_3787.3857.20
Species: uncultured bacterium (100%)
4 3897 bp 33.69 1.00 78.83
done Jill Banfield (11/15/12)
ACD18_70 ACD18_12940.6192.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 6232 bp 33.01 1.00 79.19
done Jill Banfield (11/15/12)
ACD18_5 ACD18_3293.13731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (78.57%)
14 13771 bp 33.64 1.00 79.43
done Jill Banfield (11/15/12)
ACD18_144 ACD18_193976.2688.5
Species: uncultured bacterium (66.67%)
3 2722 bp 31.63 1.00 79.46
done Jill Banfield (11/15/12)
ACD18_20 ACD18_3082.2757.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2803 bp 27.54 1.00 80.06
done Jill Banfield (11/15/12)
ACD18_130 ACD18_297594.3094.5
Class: Magasanikbacteria (66.67%)
3 3128 bp 31.46 1.00 80.66
done Jill Banfield (11/15/12)
ACD18_106 ACD18_435139.2174.4
Class: Magasanikbacteria (66.67%)
3 2208 bp 31.52 1.00 80.84
done Jill Banfield (11/15/12)
ACD18_176 ACD18_213564.2067.5
Species: uncultured bacterium (100%)
3 2101 bp 30.65 1.00 80.96
done Jill Banfield (11/15/12)
ACD18_50 ACD18_361.7203.23
Species: uncultured bacterium (55.56%)
9 7243 bp 30.10 1.00 81.43
done Jill Banfield (11/15/12)
ACD18_7 ACD18_899.4660.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
7 4706 bp 31.43 1.00 81.98
done Jill Banfield (11/15/12)
ACD18_2 ACD18_20827.9510.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (62.5%)
8 9550 bp 33.45 1.00 82.08
done Jill Banfield (11/15/12)
ACD18_65 ACD18_144155.2125.5
Species: uncultured bacterium (100%)
3 2159 bp 27.93 1.00 82.12
done Jill Banfield (11/15/12)
ACD18_129 ACD18_62117.2566.5
Species: uncultured bacterium (100%)
4 2600 bp 29.92 1.00 82.27
done Jill Banfield (11/15/12)
ACD18_93 ACD18_6434.5280.22
Species: uncultured bacterium (50%)
6 5320 bp 28.80 1.00 82.39
done Jill Banfield (11/15/12)
ACD18_161 ACD18_1025.3163.22
Species: uncultured bacterium (80%)
5 3203 bp 32.63 1.00 82.70
done Jill Banfield (11/15/12)
ACD18_186 ACD18_2011.5931.24
Species: uncultured bacterium (100%)
4 5971 bp 35.40 1.00 82.75
done Jill Banfield (11/15/12)
ACD18_155 ACD18_562.3279.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3319 bp 31.43 1.00 82.89
done Jill Banfield (11/15/12)
ACD18_17 ACD18_7077.13457.22
Species: uncultured bacterium (66.67%)
12 13497 bp 32.53 1.00 82.91
done Jill Banfield (11/15/12)
ACD18_45 ACD18_3661.11636.21
Species: uncultured bacterium (100%)
9 11682 bp 28.64 1.00 82.92
done Jill Banfield (11/15/12)
ACD18_37 ACD18_2878.11776.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 11816 bp 32.60 1.00 83.00
done Jill Banfield (11/15/12)
ACD18_185 ACD18_3768.2383.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 2423 bp 33.88 1.00 83.20
done Jill Banfield (11/15/12)
ACD18_18 ACD18_38417.22030.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (65.22%)
23 22070 bp 32.81 1.00 83.23
done Jill Banfield (11/15/12)
ACD18_107 ACD18_232411.3474.6
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 3508 bp 29.62 1.00 83.30
done Jill Banfield (11/15/12)
ACD18_117 ACD18_1038.5864.24
Species: uncultured bacterium (80%)
5 5904 bp 30.74 1.00 83.38
done Jill Banfield (11/15/12)
ACD18_98 ACD18_1639.2740.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
5 2786 bp 29.50 1.00 83.78
done Jill Banfield (11/15/12)
ACD18_35 ACD18_1638.8791.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
11 8831 bp 31.04 1.00 83.87
done Jill Banfield (11/15/12)
ACD18_184 ACD18_3910.3311.23
Species: uncultured bacterium (100%)
2 3351 bp 33.69 1.00 83.89
done Jill Banfield (11/15/12)
ACD18_55 ACD18_736.26253.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85%)
20 26293 bp 32.18 1.00 84.07
done Jill Banfield (11/15/12)
ACD18_122 ACD18_2578.2216.20
Species: uncultured bacterium (75%)
4 2256 bp 34.44 1.00 84.18
done Jill Banfield (11/15/12)
ACD18_46 ACD18_24211.2319.5
Species: uncultured bacterium (100%)
3 2353 bp 33.74 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_21 ACD18_1350.16600.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (76.47%)
17 16640 bp 31.62 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_103 ACD18_73586.2203.5
Species: uncultured bacterium (100%)
4 2237 bp 30.98 1.00 84.35
done Jill Banfield (11/15/12)
ACD18_19 ACD18_8854.4932.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4972 bp 34.79 1.00 84.65
done Jill Banfield (11/15/12)
ACD18_29 ACD18_215.21151.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60.87%)
23 21191 bp 31.68 1.00 84.76
done Jill Banfield (11/15/12)
ACD18_102 ACD18_10047.22122.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
18 22162 bp 32.74 1.00 84.85
done Jill Banfield (11/15/12)
ACD18_40 ACD18_241.4324.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4370 bp 31.24 1.00 84.99
done Jill Banfield (11/15/12)
ACD18_138 ACD18_89878.2590.5
Species: uncultured bacterium (66.67%)
3 2624 bp 30.41 1.00 85.06
done Jill Banfield (11/15/12)
ACD18_75 ACD18_1838.8437.22
Species: uncultured bacterium (100%)
6 8477 bp 32.48 1.00 85.11
done Jill Banfield (11/15/12)
ACD18_67 ACD18_321.5596.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 5636 bp 33.16 1.00 85.33
done Jill Banfield (11/15/12)
ACD18_12 ACD18_1245.6149.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6189 bp 32.07 1.00 85.46
done Jill Banfield (11/15/12)
ACD18_126 ACD18_9324.4953.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4993 bp 33.23 1.00 85.50
done Jill Banfield (11/15/12)
ACD18_89 ACD18_1427.10203.24
Species: uncultured bacterium (58.33%)
12 10243 bp 33.39 1.00 85.61
done Jill Banfield (11/15/12)
ACD18_149 ACD18_2975.4908.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4954 bp 31.91 1.00 86.66
done Jill Banfield (11/15/12)
Displaying items 51-100 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.