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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 101-150 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_82 ACD18_7063.5958.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 5998 bp 31.61 1.00 87.08
done Jill Banfield (11/15/12)
ACD18_47 ACD18_11328.16293.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (59.26%)
27 16333 bp 32.54 1.00 87.63
done Jill Banfield (11/15/12)
ACD18_163 ACD18_23163.2086.5
Species: uncultured bacterium (100%)
2 2120 bp 31.70 1.00 88.16
add Jill Banfield (11/15/12)
ACD18_145 ACD18_5212.5553.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 5599 bp 31.81 1.00 88.41
done Jill Banfield (11/15/12)
ACD18_11 ACD18_2064.29034.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (55%)
20 29074 bp 31.97 1.00 88.44
done Jill Banfield (11/15/12)
ACD18_57 ACD18_359.11295.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
12 11335 bp 33.33 1.00 88.53
done Jill Banfield (11/15/12)
ACD18_97 ACD18_2585.3696.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
5 3736 bp 33.86 1.00 88.57
done Jill Banfield (11/15/12)
ACD18_71 ACD18_25181.16825.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (69.23%)
13 16865 bp 32.43 1.00 88.59
done Jill Banfield (11/15/12)
ACD18_27 ACD18_12617.17542.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
10 17582 bp 34.70 1.00 88.61
done Jill Banfield (11/15/12)
ACD18_43 ACD18_983.37538.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.14%)
35 37578 bp 32.35 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_124 ACD18_3366.20210.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
18 20250 bp 30.85 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_171 ACD18_3116.3486.21
Species: uncultured bacterium (100%)
4 3532 bp 34.23 1.00 88.76
done Jill Banfield (11/15/12)
ACD18_76 ACD18_2950.6737.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (87.5%)
8 6783 bp 29.51 1.00 88.77
done Jill Banfield (11/15/12)
ACD18_109 ACD18_9134.2010.4
Species: uncultured bacterium (100%)
4 2044 bp 32.00 1.00 88.80
done Jill Banfield (11/15/12)
ACD18_137 ACD18_824.12024.21
Species: uncultured bacterium (75%)
8 12064 bp 34.30 1.00 88.83
done Jill Banfield (11/15/12)
ACD18_24 ACD18_118085.3572.5
Species: uncultured bacterium (100%)
5 3606 bp 30.48 1.00 88.94
done Jill Banfield (11/15/12)
ACD18_92 ACD18_602.13243.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 13283 bp 32.40 1.00 88.96
done Jill Banfield (11/15/12)
ACD18_179 ACD18_3421.2544.21
Species: uncultured bacterium (100%)
3 2584 bp 31.70 1.00 89.05
done Jill Banfield (11/15/12)
ACD18_125 ACD18_679.13138.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (86.67%)
15 13178 bp 32.08 1.00 89.13
done Jill Banfield (11/15/12)
ACD18_105 ACD18_384462.2299.4
Species: uncultured bacterium (80%)
5 2333 bp 33.26 1.00 89.24
done Jill Banfield (11/15/12)
ACD18_101 ACD18_16097.13827.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (57.14%)
14 13867 bp 30.99 1.00 89.33
done Jill Banfield (11/15/12)
ACD18_10 ACD18_2235.12250.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (57.14%)
14 12290 bp 32.01 1.00 89.46
done Jill Banfield (11/15/12)
ACD18_108 ACD18_384.14474.23
Species: uncultured bacterium (53.33%)
15 14514 bp 33.17 1.00 89.56
done Jill Banfield (11/15/12)
ACD18_119 ACD18_95585.2038.5
Species: uncultured bacterium (100%)
2 2072 bp 33.35 1.00 90.06
done Jill Banfield (11/15/12)
ACD18_23 ACD18_242.30582.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75.68%)
37 30622 bp 31.47 1.00 90.12
done Jill Banfield (11/15/12)
ACD18_121 ACD18_2351.4237.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 4283 bp 33.64 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_136 ACD18_54037.2449.7
Species: uncultured bacterium (100%)
5 2483 bp 29.84 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_61 ACD18_101906.2675.5
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 2709 bp 34.37 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_16 ACD18_1979.3067.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3113 bp 30.49 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_146 ACD18_1959.3108.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3148 bp 34.91 1.00 90.91
done Jill Banfield (11/15/12)
ACD18_128 ACD18_10851.6655.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 6695 bp 32.49 1.00 91.05
done Jill Banfield (11/15/12)
ACD18_39 ACD18_7129.39938.22
Species: uncultured bacterium (54.05%)
37 39978 bp 31.03 1.00 91.06
done Jill Banfield (11/15/12)
ACD18_8 ACD18_60.4906.23
Species: uncultured bacterium (75%)
8 4952 bp 29.89 1.00 91.11
done Jill Banfield (11/15/12)
ACD18_85 ACD18_23352.2242.5
Species: uncultured bacterium (100%)
4 2276 bp 31.33 1.00 91.21
done Jill Banfield (11/15/12)
ACD18_111 ACD18_155115.3404.7
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 3438 bp 31.68 1.00 91.27
done Jill Banfield (11/15/12)
ACD18_120 ACD18_290611.2174.5
Species: uncultured bacterium (50%)
4 2208 bp 28.85 1.00 91.44
done Jill Banfield (11/15/12)
ACD18_116 ACD18_13308.2953.6
Species: uncultured bacterium (100%)
3 2987 bp 29.90 1.00 91.60
done Jill Banfield (11/15/12)
ACD18_91 ACD18_1113.13521.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
12 13561 bp 31.32 1.00 91.65
done Jill Banfield (11/15/12)
ACD18_36 ACD18_1371.18886.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (63.64%)
22 18926 bp 33.21 1.00 91.72
done Jill Banfield (11/15/12)
ACD18_113 ACD18_505.2402.21
Species: uncultured bacterium (50%)
2 2448 bp 31.05 1.00 91.91
done Jill Banfield (11/15/12)
ACD18_132 ACD18_1539.6751.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6797 bp 30.66 1.00 92.11
done Jill Banfield (11/15/12)
ACD18_139 ACD18_1056.6448.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6488 bp 34.03 1.00 92.15
done Jill Banfield (11/15/12)
ACD18_30 ACD18_770.43352.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
33 43392 bp 30.20 1.00 92.26
done Jill Banfield (11/15/12)
ACD18_143 ACD18_8988.9158.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 9198 bp 32.56 1.00 92.56
done Jill Banfield (11/15/12)
ACD18_59 ACD18_28437.2186.5
Species: uncultured bacterium (100%)
3 2220 bp 31.13 1.00 92.57
done Jill Banfield (11/15/12)
ACD18_15 ACD18_3062.4996.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 5042 bp 30.35 1.00 92.70
done Jill Banfield (11/15/12)
ACD18_56 ACD18_8207.6123.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 6163 bp 30.52 1.00 92.73
done Jill Banfield (11/15/12)
ACD18_74 ACD18_123610.2209.5
Species: uncultured bacterium (100%)
2 2243 bp 32.68 1.00 92.82
done Jill Banfield (11/15/12)
ACD18_77 ACD18_863.12635.23
Species: uncultured bacterium (55.56%)
9 12675 bp 32.64 1.00 93.04
done Jill Banfield (11/15/12)
ACD18_158 ACD18_39124.2976.6
Species: uncultured bacterium (100%)
3 3010 bp 27.04 1.00 93.09
done Jill Banfield (11/15/12)
Displaying items 101-150 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.