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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 51-100 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_79 ACD18_11569.7448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 7488 bp 33.44 1.00 72.32
done Jill Banfield (11/15/12)
ACD18_80 ACD18_789.11094.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 11134 bp 34.17 1.00 95.11
done Jill Banfield (11/15/12)
ACD18_81 ACD18_237766.4003.4
Species: uncultured bacterium (50%)
6 4037 bp 29.95 1.00 77.51
done Jill Banfield (11/15/12)
ACD18_82 ACD18_7063.5958.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 5998 bp 31.61 1.00 87.08
done Jill Banfield (11/15/12)
ACD18_83 ACD18_3623.14081.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (92.31%)
13 14121 bp 32.55 1.00 76.23
done Jill Banfield (11/15/12)
ACD18_84 ACD18_147591.3316.5
Species: uncultured bacterium (100%)
4 3350 bp 34.45 1.00 55.07
done Jill Banfield (11/15/12)
ACD18_85 ACD18_23352.2242.5
Species: uncultured bacterium (100%)
4 2276 bp 31.33 1.00 91.21
done Jill Banfield (11/15/12)
ACD18_86 ACD18_29943.2094.6
Species: uncultured bacterium (100%)
2 2128 bp 33.55 1.00 97.13
done Jill Banfield (11/15/12)
ACD18_87 ACD18_3491.2369.6
Species: uncultured bacterium (100%)
2 2403 bp 28.92 1.00 77.78
done Jill Banfield (11/15/12)
ACD18_88 ACD18_8348.2323.23
Phylum: Parcubacteria (66.67%)
3 2363 bp 33.31 1.00 74.02
done Jill Banfield (11/15/12)
ACD18_89 ACD18_1427.10203.24
Species: uncultured bacterium (58.33%)
12 10243 bp 33.39 1.00 85.61
done Jill Banfield (11/15/12)
ACD18_90 ACD18_63338.4447.4
Species: uncultured bacterium (100%)
4 4481 bp 33.81 1.00 71.37
done Jill Banfield (11/15/12)
ACD18_91 ACD18_1113.13521.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
12 13561 bp 31.32 1.00 91.65
done Jill Banfield (11/15/12)
ACD18_92 ACD18_602.13243.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 13283 bp 32.40 1.00 88.96
done Jill Banfield (11/15/12)
ACD18_93 ACD18_6434.5280.22
Species: uncultured bacterium (50%)
6 5320 bp 28.80 1.00 82.39
done Jill Banfield (11/15/12)
ACD18_94 ACD18_3772.5116.20
Species: uncultured bacterium (60%)
5 5156 bp 34.91 1.00 72.50
done Jill Banfield (11/15/12)
ACD18_95 ACD18_252955.2603.4
Species: uncultured bacterium (100%)
3 2637 bp 32.61 1.00 37.54
done Jill Banfield (11/15/12)
ACD18_96 ACD18_1277.7831.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 7871 bp 30.78 1.00 93.69
done Jill Banfield (11/15/12)
ACD18_97 ACD18_2585.3696.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
5 3736 bp 33.86 1.00 88.57
done Jill Banfield (11/15/12)
ACD18_98 ACD18_1639.2740.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
5 2786 bp 29.50 1.00 83.78
done Jill Banfield (11/15/12)
ACD18_99 ACD18_82084.4148.5
Species: uncultured bacterium (83.33%)
6 4182 bp 27.52 1.00 78.48
done Jill Banfield (11/15/12)
ACD18_100 ACD18_573.7598.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (81.82%)
11 7638 bp 34.07 1.00 74.12
done Jill Banfield (11/15/12)
ACD18_101 ACD18_16097.13827.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (57.14%)
14 13867 bp 30.99 1.00 89.33
done Jill Banfield (11/15/12)
ACD18_102 ACD18_10047.22122.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
18 22162 bp 32.74 1.00 84.85
done Jill Banfield (11/15/12)
ACD18_103 ACD18_73586.2203.5
Species: uncultured bacterium (100%)
4 2237 bp 30.98 1.00 84.35
done Jill Banfield (11/15/12)
ACD18_104 ACD18_1209.1972.22
Species: uncultured bacterium (100%)
2 2018 bp 31.32 1.00 94.10
done Jill Banfield (11/15/12)
ACD18_105 ACD18_384462.2299.4
Species: uncultured bacterium (80%)
5 2333 bp 33.26 1.00 89.24
done Jill Banfield (11/15/12)
ACD18_106 ACD18_435139.2174.4
Class: Magasanikbacteria (66.67%)
3 2208 bp 31.52 1.00 80.84
done Jill Banfield (11/15/12)
ACD18_107 ACD18_232411.3474.6
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 3508 bp 29.62 1.00 83.30
done Jill Banfield (11/15/12)
ACD18_108 ACD18_384.14474.23
Species: uncultured bacterium (53.33%)
15 14514 bp 33.17 1.00 89.56
done Jill Banfield (11/15/12)
ACD18_109 ACD18_9134.2010.4
Species: uncultured bacterium (100%)
4 2044 bp 32.00 1.00 88.80
done Jill Banfield (11/15/12)
ACD18_110 ACD18_1193.5388.23
Species: uncultured bacterium (50%)
6 5428 bp 31.41 1.00 98.43
done Jill Banfield (11/15/12)
ACD18_111 ACD18_155115.3404.7
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 3438 bp 31.68 1.00 91.27
done Jill Banfield (11/15/12)
ACD18_112 ACD18_1200.3006.21
Species: uncultured bacterium (66.67%)
3 3046 bp 30.86 1.00 55.15
done Jill Banfield (11/15/12)
ACD18_113 ACD18_505.2402.21
Species: uncultured bacterium (50%)
2 2448 bp 31.05 1.00 91.91
done Jill Banfield (11/15/12)
ACD18_114 ACD18_103789.3452.5
Species: uncultured bacterium (100%)
3 3486 bp 30.92 1.00 57.83
done Jill Banfield (11/15/12)
ACD18_115 ACD18_67308.7508.5
Species: uncultured bacterium (85.71%)
7 7542 bp 31.65 1.00 94.03
done Jill Banfield (11/15/12)
ACD18_116 ACD18_13308.2953.6
Species: uncultured bacterium (100%)
3 2987 bp 29.90 1.00 91.60
done Jill Banfield (11/15/12)
ACD18_117 ACD18_1038.5864.24
Species: uncultured bacterium (80%)
5 5904 bp 30.74 1.00 83.38
done Jill Banfield (11/15/12)
ACD18_118 ACD18_1610.4648.22
Species: uncultured bacterium (71.43%)
7 4694 bp 28.38 1.00 94.40
done Jill Banfield (11/15/12)
ACD18_119 ACD18_95585.2038.5
Species: uncultured bacterium (100%)
2 2072 bp 33.35 1.00 90.06
done Jill Banfield (11/15/12)
ACD18_120 ACD18_290611.2174.5
Species: uncultured bacterium (50%)
4 2208 bp 28.85 1.00 91.44
done Jill Banfield (11/15/12)
ACD18_121 ACD18_2351.4237.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 4283 bp 33.64 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_122 ACD18_2578.2216.20
Species: uncultured bacterium (75%)
4 2256 bp 34.44 1.00 84.18
done Jill Banfield (11/15/12)
ACD18_123 ACD18_380992.2756.5
Species: R_OD1_Magasanikbacteria_44_11 (50%)
2 2790 bp 27.17 1.00 69.89
done Jill Banfield (11/15/12)
ACD18_124 ACD18_3366.20210.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
18 20250 bp 30.85 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_125 ACD18_679.13138.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (86.67%)
15 13178 bp 32.08 1.00 89.13
done Jill Banfield (11/15/12)
ACD18_126 ACD18_9324.4953.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4993 bp 33.23 1.00 85.50
done Jill Banfield (11/15/12)
ACD18_127 ACD18_3962.2951.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 2997 bp 29.20 1.00 62.96
done Jill Banfield (11/15/12)
ACD18_128 ACD18_10851.6655.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 6695 bp 32.49 1.00 91.05
done Jill Banfield (11/15/12)
Displaying items 51-100 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.