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SCNpilot_cont_1000_p_scaffold_1677

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1677_1
unknown

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_2
Ectocarpus siliculosus, Ectocarpus, Ectocarpales, Phaeophyceae, Eukaryota

Not on your lists

966..1184
DNA (219bp) protein (73aa)
SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) n=1 Tax=Ectocarpus siliculosus RepID=D7FGT8_ECTSI
SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) {ECO:0000313|EMBL:CBJ28364.1}; TaxID=2880 species="Eukaryota; Stramenopiles; PX clade; Phaeophyceae; Ectocarpales; Ectocarpaceae; Ectocarpus.;" source="Ectocarpus siliculosus (Brown alga).;"
structural maintenance of chromosome 2; K06674 structural maintenance of chromosome 2
SCNpilot_cont_1000_p_scaffold_1677_3
Amborella trichopoda, Amborella, Amborellales, Streptophyta, Viridiplantae

Not on your lists

1204..1644
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5C184_VITVI
Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719}; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella.;" source="Amborella trichopoda.;"
structural maintenance of chromosomes protein 2-1-like; K06674 structural maintenance of chromosome 2
SCNpilot_cont_1000_p_scaffold_1677_4
Fusarium oxysporum, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

2034..3005
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Fusarium oxysporum (strain Fo5176) RepID=F9FFS9_FUSOF
Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719}; TaxID=1089448 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.;" source="Fusarium oxysporum f. sp. radicis-lycopersici 26381.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1677_5
Illicium henryi, Illicium, Austrobaileyales, Streptophyta, Viridiplantae

Not on your lists

3002..3460
DNA (459bp) protein (153aa)
PREDICTED: structural maintenance of chromosomes protein 2-1-like n=1 Tax=Cucumis sativus RepID=UPI0002B4A27F
Structural maintenance of chromosomes protein 2 {ECO:0000313|EMBL:AIU48059.1}; Flags: Fragment;; TaxID=114516 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Austrobaileyales; Schisandraceae; Illicium.;" source="Illicium henryi.;"
structural maintenance of chromosomes protein 2-1-like
SCNpilot_cont_1000_p_scaffold_1677_6
Dictyostelium fasciculatum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

3469..3981
DNA (513bp) protein (171aa)
Structural maintenance of chromosomes protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PZZ3_DICFS
smc2; structural maintenance of chromosome protein
Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719}; TaxID=1054147 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium fasciculatum (strain SH3) (Slime mold).;"
SCNpilot_cont_1000_p_scaffold_1677_7
Selaginella moellendorffii, Selaginella, Selaginellales, Lycopodiidae, Streptophyta, Viridiplantae

Not on your lists

4121..4681
DNA (561bp) protein (187aa)
Structural maintenance of chromosomes protein n=1 Tax=Selaginella moellendorffii RepID=D8TEJ2_SELML
hypothetical protein; K06674 structural maintenance of chromosome 2
Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719}; TaxID=88036 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella.;" source="Selaginella moellendorffii (Spikemoss).;"
SCNpilot_cont_1000_p_scaffold_1677_8
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

Not on your lists

4758..5183
DNA (426bp) protein (142aa)
Structural maintenance of chromosomes protein n=1 Tax=Daphnia pulex RepID=E9FT09_DAPPU
Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
hypothetical protein; K06674 structural maintenance of chromosome 2
SCNpilot_cont_1000_p_scaffold_1677_9
Auxenochlorella protothecoides, Auxenochlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

5192..5431
DNA (240bp) protein (80aa)
Structural maintenance of chromosomes protein 2 n=1 Tax=Xenopus laevis RepID=SMC2_XENLA
Structural maintenance of chromosomes protein 2-1 {ECO:0000313|EMBL:KFM28378.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella.;" source="Auxenochlorella protothecoides (Green microalga) (Chlorella; protothecoides).;"
structural maintenance of chromosomes protein 2-like; K06674 structural maintenance of chromosome 2
SCNpilot_cont_1000_p_scaffold_1677_10
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5750..6682)
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Neisseria meningitidis RepID=L5REY7_NEIME
Cell envelope integrity inner membrane protein TolA {ECO:0000313|EMBL:AHG85966.1}; TaxID=1263832 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="Bibersteinia trehalosi USDA-ARS-USMARC-190.;"
adiponectin receptor protein 1-like
SCNpilot_cont_1000_p_scaffold_1677_11
unknown

Not on your lists

comp(6781..6948)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_12
unknown

Not on your lists

comp(6933..7190)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_13
unknown

Not on your lists

7643..8545
DNA (903bp) protein (301aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_14
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

8810..10003
DNA (1194bp) protein (398aa)
PREDICTED: E3 ubiquitin-protein ligase TRIM71-like n=1 Tax=unknown RepID=UPI0002B425FC
similar to predicted protein
Bbox zinc finger domain containing protein {ECO:0000313|EMBL:ELR19661.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
SCNpilot_cont_1000_p_scaffold_1677_15
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(9950..10681)
DNA (732bp) protein (244aa)
GTP-binding protein yptV1 n=2 Tax=Volvox carteri RepID=YPTV1_VOLCA
rabD; RabD/Rab1; K07874 Ras-related protein Rab-1A
GTP-binding protein yptV1; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carteri (Green alga).;"
SCNpilot_cont_1000_p_scaffold_1677_16
unknown

Not on your lists

11287..11658
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_17
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11668..12087
DNA (420bp) protein (140aa)
heme ABC transporter ATP-binding protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255ACB6
putative ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_cont_1000_p_scaffold_1677_18
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12618..13178
DNA (561bp) protein (187aa)
ABC transporter, ATP-binding protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTL9_9DELT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EPX60003.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
mac; ABC transporter ATP-binding protein
SCNpilot_cont_1000_p_scaffold_1677_19
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

13179..13556
DNA (378bp) protein (126aa)
Putative uncharacterized protein ABCF3 n=1 Tax=Dictyostelium purpureum RepID=F0ZTP9_DICPU
ABCF3; hypothetical protein
Putative uncharacterized protein ABCF3 {ECO:0000313|EMBL:EGC32683.1}; TaxID=5786 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
SCNpilot_cont_1000_p_scaffold_1677_20
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13571..13777
DNA (207bp) protein (69aa)
ABC transporter ATP-binding protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7IIN2_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD87651.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
ABC transporter ATP-binding protein
SCNpilot_cont_1000_p_scaffold_1677_21
unknown

Not on your lists

13952..14227
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_22
Opisthorchis viverrini, Opisthorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

Not on your lists

14273..14455
DNA (183bp) protein (61aa)
inhibitor of apoptosis (iap) domain family member ; K10585 ubiquitin-conjugating enzyme E2 Z [EC:6.3.2.19]
PREDICTED: ubiquitin-conjugating enzyme E2 Z-like isoform X2 n=1 Tax=Aplysia californica RepID=UPI000359408E
Uncharacterized protein {ECO:0000313|EMBL:KER20444.1}; TaxID=6198 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Opisthorchis.;" source="Opisthorchis viverrini.;"
SCNpilot_cont_1000_p_scaffold_1677_23
unknown

Not on your lists

15045..15368
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_24
Mycoplasma penetrans, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(15602..17122)
DNA (1521bp) protein (507aa)
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=272633 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma penetrans (strain HF-2).;"
DNA topoisomerase IV subunit A n=1 Tax=Mycoplasma penetrans (strain HF-2) RepID=Q8EVB9_MYCPE
SCNpilot_cont_1000_p_scaffold_1677_25
unknown

Not on your lists

comp(17510..18136)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_26
unknown

Not on your lists

comp(18148..18624)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_27
unknown

Not on your lists

comp(19021..19647)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_28
unknown

Not on your lists

19720..20439
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_29
unknown

Not on your lists

comp(20453..20629)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1677_30
unknown

Not on your lists

20815..21387
DNA (573bp) protein (191aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

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