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SCNpilot_cont_300_bf_scaffold_3406

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3406_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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94..942
DNA (849bp) protein (283aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
cysM; cysteine synthase B (EC:2.5.1.47)
Cysteine synthase B n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJF2_9PROT rbh
SCNpilot_cont_300_bf_scaffold_3406_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1066..1839
DNA (774bp) protein (258aa)
Polysaccharide biosynthesis protein WlaX n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJF8_9PROT rbh
Polysaccharide biosynthesis protein WlaX {ECO:0000313|EMBL:CCU63556.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3406_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1830..3218
DNA (1389bp) protein (463aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_0
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RLMD_NITMU rbh
rumA; 23S rRNA 5-methyluridine methyltransferase
SCNpilot_cont_300_bf_scaffold_3406_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3313..4008)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6W4_NITMU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75507.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
SCNpilot_cont_300_bf_scaffold_3406_5
unknown

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4638..4886
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3406_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4904..5560
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D556_SPHYA rbh
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KEZ17019.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3406_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5557..6657
DNA (1101bp) protein (367aa)
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G184_ACICJ rbh
Eco57I restriction-modification methylase {ECO:0000313|EMBL:KEZ17018.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source=
SCNpilot_cont_300_bf_scaffold_3406_8
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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6727..7137
DNA (411bp) protein (137aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:ACE03700.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ACE03700.1};; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chl
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3ENH0_CHLPB
SCNpilot_cont_300_bf_scaffold_3406_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7130..9676
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D990_SPHYA rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU74095.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3406_10
unknown

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9723..10043
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3406_11
unknown

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comp(9995..10135)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3406_12
unknown

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comp(10617..11312)
DNA (696bp) protein (232aa)

This feature has no annotations

Displaying 12 items

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