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SCNpilot_cont_300_bf_scaffold_2553

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2553_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2..1096)
DNA (1095bp) protein (365aa)
ligA; DNA ligase (NAD(+)) (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEU7_9BACT
SCNpilot_cont_300_bf_scaffold_2553_2
unknown

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comp(1366..2127)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_3
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2166..4379)
DNA (2214bp) protein (738aa)
Putative peptidase n=1 Tax=Azoarcus sp. KH32C RepID=H0PYJ7_9RHOO rbh
putative peptidase
Putative peptidase {ECO:0000313|EMBL:BAL22429.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_cont_300_bf_scaffold_2553_4
unknown

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comp(4394..4726)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4827..5675
DNA (849bp) protein (283aa)
short-chain dehydrogenase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B52CB0
Putative oxidoreductase/Short-chain dehydrogenase {ECO:0000313|EMBL:AKF04063.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sanda
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2553_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5997..6950
DNA (954bp) protein (318aa)
UPI0003CF4FB4 related cluster n=1 Tax=unknown RepID=UPI0003CF4FB4
AraC family transcriptional regulator {ECO:0000313|EMBL:ESW82950.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2553_7
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7019..7660
DNA (642bp) protein (214aa)
Glutathione S-transferase-like protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28PM5_JANSC
glutathione S-transferase-like protein
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABD55337.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jann
SCNpilot_cont_300_bf_scaffold_2553_8
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7673..7909
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0JJK5_RHILV
Uncharacterized protein {ECO:0000313|EMBL:KJK56083.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2553_9
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7906..8523
DNA (618bp) protein (206aa)
3-methyladenine DNA glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RBG_16_Gammaproteobacteria_62_13__curated
3-methyladenine DNA glycosylase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FA3517
3-methyladenine DNA glycosylase
SCNpilot_cont_300_bf_scaffold_2553_10
unknown

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comp(8578..9594)
DNA (1017bp) protein (339aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_11
unknown

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9965..10111
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_12
unknown

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10439..10852
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_13
unknown

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comp(10922..11029)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_14
unknown

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11188..12264
DNA (1077bp) protein (359aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2553_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12336..12920
DNA (585bp) protein (195aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYE7_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN95611.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
SCNpilot_cont_300_bf_scaffold_2553_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12913..13770
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYF0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95612.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_2553_17
unknown

Not on your lists

13782..14039
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 17 items

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