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SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

SCNPILOT_CONT_300_BF_Myxococcales_68_5
In projects: SCNPILOT_CONT_300_BF

Consensus taxonomy: Myxococcales  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_300_bf_UNK

Properties

Avg. coverage: 5.22 Longest contig: 37.89 Kbp Bin length: 9.32 Mbp GC content: 67.91 %
Contigs count: 1703 Features count: 9277 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Displaying items 901-950 of 1703 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_26184
Domain: Bacteria (60%)
5 5482 bp 69.74 5.31 89.31
SCNpilot_cont_300_bf_scaffold_3572
Order: Myxococcales (66.67%)
9 8665 bp 68.91 5.79 89.32
SCNpilot_cont_300_bf_scaffold_8506
Species: Chondromyces apiculatus (50%)
4 6099 bp 68.08 5.64 89.33
SCNpilot_cont_300_bf_scaffold_1875
Domain: Bacteria (54.55%)
11 12207 bp 70.48 5.63 89.33
SCNpilot_cont_300_bf_scaffold_10117
Species: Chondromyces apiculatus (50%)
4 4505 bp 69.66 4.68 89.37
SCNpilot_cont_300_bf_scaffold_16762
Species: Sorangium cellulosum (50%)
4 3038 bp 68.96 4.38 89.37
SCNpilot_cont_300_bf_scaffold_4796
Order: Myxococcales (50%)
8 11413 bp 69.50 5.48 89.37
SCNpilot_cont_300_bf_scaffold_38420
Species: Sorangium cellulosum (50%)
4 3128 bp 63.24 4.81 89.39
SCNpilot_cont_300_bf_scaffold_9108
Species: Sorangium cellulosum (50%)
2 3413 bp 68.53 3.82 89.39
SCNpilot_cont_300_bf_scaffold_63244
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated (50%)
2 1577 bp 62.14 4.77 89.41
SCNpilot_cont_300_bf_scaffold_1860
Order: Myxococcales (53.85%)
13 12696 bp 69.08 5.38 89.44
SCNpilot_cont_300_bf_scaffold_3434
Species: Chondromyces apiculatus (50%)
6 7342 bp 66.64 5.23 89.44
SCNpilot_cont_300_bf_scaffold_3035
Order: Myxococcales (50%)
4 6882 bp 70.34 5.98 89.45
SCNpilot_cont_300_bf_scaffold_3911
Order: Myxococcales (80%)
5 5755 bp 68.83 5.32 89.45
SCNpilot_cont_300_bf_scaffold_38714
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)
1 1442 bp 69.21 5.40 89.46
SCNpilot_cont_300_bf_scaffold_5596
Species: Sorangium cellulosum (50%)
4 4554 bp 67.72 6.94 89.46
SCNpilot_cont_300_bf_scaffold_5074
Species: Sorangium cellulosum (50%)
4 4838 bp 69.35 6.64 89.48
SCNpilot_cont_300_bf_scaffold_20717
Species: Chondromyces apiculatus (50%)
6 4814 bp 66.45 4.69 89.49
SCNpilot_cont_300_bf_scaffold_26662
Species: Candidatus Entotheonella sp. TSY2 (50%)
2 1840 bp 67.17 4.64 89.51
SCNpilot_cont_300_bf_scaffold_20672
Species: Sorangium cellulosum (66.67%)
3 2155 bp 69.14 3.84 89.51
SCNpilot_cont_300_bf_scaffold_2614
Order: Myxococcales (60%)
5 9712 bp 68.12 5.32 89.52
SCNpilot_cont_300_bf_scaffold_6872
Order: Myxococcales (50%)
6 6362 bp 68.69 4.73 89.59
SCNpilot_cont_300_bf_scaffold_1493
Order: Myxococcales (77.78%)
9 13907 bp 68.08 5.49 89.61
SCNpilot_cont_300_bf_scaffold_3530
Domain: Bacteria (50%)
8 6180 bp 68.54 5.00 89.61
SCNpilot_cont_300_bf_scaffold_10280
Phylum: Proteobacteria (50%)
8 6025 bp 68.81 5.08 89.63
SCNpilot_cont_300_bf_scaffold_25691
Species: Sorangium cellulosum (50%)
2 1881 bp 69.80 4.80 89.63
SCNpilot_cont_300_bf_scaffold_10005
Order: Myxococcales (85.71%)
7 7447 bp 68.94 4.58 89.63
SCNpilot_cont_300_bf_scaffold_46581
Species: Devosia limi (100%)
2 1265 bp 66.09 3.77 89.64
SCNpilot_cont_300_bf_scaffold_13961
Species: Sorangium cellulosum (50%)
4 4790 bp 70.90 4.82 89.69
SCNpilot_cont_300_bf_scaffold_8425
Order: Myxococcales (50%)
4 4231 bp 69.61 3.38 89.70
SCNpilot_cont_300_bf_scaffold_21268
Phylum: Proteobacteria (50%)
6 5561 bp 69.79 6.50 89.71
SCNpilot_cont_300_bf_scaffold_10196
Order: Myxococcales (60%)
5 5507 bp 70.29 4.79 89.72
SCNpilot_cont_300_bf_scaffold_15776
Class: Deltaproteobacteria (60%)
5 3052 bp 67.92 3.78 89.74
SCNpilot_cont_300_bf_scaffold_16728
Order: Myxococcales (100%)
3 2945 bp 69.88 6.65 89.75
SCNpilot_cont_300_bf_scaffold_7251
Domain: Bacteria (85.71%)
7 7051 bp 68.50 6.41 89.77
SCNpilot_cont_300_bf_scaffold_5255
Class: Deltaproteobacteria (50%)
8 6825 bp 68.06 5.30 89.80
SCNpilot_cont_300_bf_scaffold_72710
Species: Sorangium cellulosum (50%)
2 1286 bp 62.52 4.49 89.81
SCNpilot_cont_300_bf_scaffold_6636
Order: Myxococcales (55.56%)
9 6673 bp 69.97 5.12 89.82
SCNpilot_cont_300_bf_scaffold_55195
Species: Candidatus Entotheonella sp. TSY2 (100%)
1 1092 bp 70.97 3.91 89.84
SCNpilot_cont_300_bf_scaffold_46675
Species: Sorangium cellulosum (100%)
2 1930 bp 68.86 5.07 89.84
SCNpilot_cont_300_bf_scaffold_4535
Phylum: Proteobacteria (71.43%)
7 11221 bp 64.82 4.74 89.86
SCNpilot_cont_300_bf_scaffold_8034
Species: Chondromyces apiculatus (50%)
4 3659 bp 68.38 4.66 89.86
SCNpilot_cont_300_bf_scaffold_3340
Domain: Bacteria (55.56%)
9 10773 bp 69.29 5.68 89.89
SCNpilot_cont_300_bf_scaffold_6942
Species: Chondromyces apiculatus (66.67%)
3 4502 bp 68.41 5.30 89.89
SCNpilot_cont_300_bf_scaffold_12014
Species: Sorangium cellulosum (50%)
4 2923 bp 70.61 5.41 89.91
SCNpilot_cont_300_bf_scaffold_43060
Species: Sorangium cellulosum (50%)
2 1338 bp 68.46 4.69 89.91
SCNpilot_cont_300_bf_scaffold_4532
Species: Sorangium cellulosum (50%)
6 5205 bp 70.36 4.68 89.91
SCNpilot_cont_300_bf_scaffold_43387
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1331 bp 58.15 3.21 89.93
SCNpilot_cont_300_bf_scaffold_11619
Species: Singulisphaera acidiphila (50%)
6 5511 bp 67.70 4.14 89.98
SCNpilot_cont_300_bf_scaffold_19250
Species: Chondromyces apiculatus (50%)
2 2250 bp 70.49 4.35 90.00
Displaying items 901-950 of 1703 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.