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SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

SCNPILOT_CONT_300_BF_Myxococcales_68_5
In projects: SCNPILOT_CONT_300_BF

Consensus taxonomy: Myxococcales  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_300_bf_UNK

Properties

Avg. coverage: 5.22 Longest contig: 37.89 Kbp Bin length: 9.32 Mbp GC content: 67.91 %
Contigs count: 1703 Features count: 9277 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Displaying items 951-1000 of 1703 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_19891
Phylum: Proteobacteria (50%)
4 3882 bp 68.39 5.56 90.03
SCNpilot_cont_300_bf_scaffold_17462
Order: Myxococcales (53.85%)
13 11509 bp 68.42 4.95 90.03
SCNpilot_cont_300_bf_scaffold_1619
Order: Myxococcales (52.63%)
19 26172 bp 67.84 5.33 90.04
SCNpilot_cont_300_bf_scaffold_6751
Species: Sorangium cellulosum (100%)
9 7336 bp 69.22 5.13 90.05
SCNpilot_cont_300_bf_scaffold_49718
Species: Sorangium cellulosum (100%)
1 1206 bp 68.41 5.20 90.05
SCNpilot_cont_300_bf_scaffold_4989
Domain: Bacteria (71.43%)
21 17803 bp 67.43 5.26 90.07
SCNpilot_cont_300_bf_scaffold_10595
Order: Myxococcales (50%)
4 3134 bp 70.07 7.37 90.08
SCNpilot_cont_300_bf_scaffold_11267
Class: Actinobacteria (50%)
8 6260 bp 68.64 6.17 90.10
SCNpilot_cont_300_bf_scaffold_28570
Species: Chondromyces apiculatus (50%)
2 1761 bp 66.50 5.84 90.12
SCNpilot_cont_300_bf_scaffold_14951
Order: Myxococcales (50%)
4 4204 bp 66.98 4.90 90.13
SCNpilot_cont_300_bf_scaffold_8396
Phylum: Proteobacteria (53.85%)
13 15726 bp 67.21 5.03 90.14
SCNpilot_cont_300_bf_scaffold_10477
Order: Myxococcales (50%)
4 3155 bp 67.13 5.33 90.14
SCNpilot_cont_300_bf_scaffold_37908
Species: Chondromyces apiculatus (50%)
4 2476 bp 68.13 4.66 90.15
SCNpilot_cont_300_bf_scaffold_30524
Order: Myxococcales (75%)
4 2256 bp 70.70 4.67 90.16
SCNpilot_cont_300_bf_scaffold_6337
Domain: Bacteria (50%)
8 7659 bp 68.12 6.36 90.17
SCNpilot_cont_300_bf_scaffold_6016
Species: Sorangium cellulosum (57.14%)
7 6877 bp 68.43 5.58 90.17
SCNpilot_cont_300_bf_scaffold_29593
Species: RHI_Rhodobacterales_62_75 (50%)
2 1723 bp 65.41 2.91 90.19
SCNpilot_cont_300_bf_scaffold_2901
Order: Myxococcales (54.55%)
11 11052 bp 69.31 5.34 90.20
SCNpilot_cont_300_bf_scaffold_8138
Phylum: Proteobacteria (60%)
5 6522 bp 63.66 4.93 90.20
SCNpilot_cont_300_bf_scaffold_16203
Species: Sorangium cellulosum (50%)
4 3319 bp 70.80 5.29 90.21
SCNpilot_cont_300_bf_scaffold_1804
Order: Myxococcales (68.75%)
16 15743 bp 67.36 5.61 90.21
SCNpilot_cont_300_bf_scaffold_12095
Species: Myxococcus xanthus (50%)
2 2913 bp 70.31 6.98 90.22
SCNpilot_cont_300_bf_scaffold_19062
Species: Sorangium cellulosum (66.67%)
3 2264 bp 68.11 3.66 90.24
SCNpilot_cont_300_bf_scaffold_4500
Order: Myxococcales (71.43%)
14 14492 bp 68.20 5.25 90.28
SCNpilot_cont_300_bf_scaffold_5205 10 10763 bp 68.76 4.50 90.31
SCNpilot_cont_300_bf_scaffold_27785
Order: Myxococcales (50%)
4 3252 bp 67.80 4.63 90.31
SCNpilot_cont_300_bf_scaffold_10936
Species: Sorangium cellulosum (50%)
4 3079 bp 69.44 4.40 90.32
SCNpilot_cont_300_bf_scaffold_4846
Order: Myxococcales (60%)
10 18509 bp 70.46 6.16 90.33
SCNpilot_cont_300_bf_scaffold_6638
Domain: Bacteria (50%)
6 6353 bp 69.24 4.90 90.34
SCNpilot_cont_300_bf_scaffold_2472
Species: Sorangium cellulosum (75%)
8 8066 bp 67.94 4.85 90.34
SCNpilot_cont_300_bf_scaffold_25658
Species: Chondromyces apiculatus (50%)
2 2872 bp 69.25 5.16 90.36
SCNpilot_cont_300_bf_scaffold_4413
Order: Myxococcales (71.43%)
7 9558 bp 69.51 5.41 90.36
SCNpilot_cont_300_bf_scaffold_16543
Species: Sorangium cellulosum (66.67%)
3 3688 bp 68.79 4.83 90.37
SCNpilot_cont_300_bf_scaffold_4496
Phylum: Proteobacteria (50%)
10 11614 bp 67.68 4.95 90.38
SCNpilot_cont_300_bf_scaffold_1803
Class: Deltaproteobacteria (50%)
14 13456 bp 68.35 4.53 90.38
SCNpilot_cont_300_bf_scaffold_13239
Class: Deltaproteobacteria (60%)
5 5940 bp 66.46 4.44 90.40
SCNpilot_cont_300_bf_scaffold_5405
Order: Myxococcales (72.73%)
11 7207 bp 68.96 5.71 90.41
SCNpilot_cont_300_bf_scaffold_28828
Species: Chondromyces apiculatus (50%)
4 2797 bp 69.32 6.73 90.42
SCNpilot_cont_300_bf_scaffold_10820
Domain: Bacteria (62.5%)
8 6201 bp 66.99 4.70 90.42
SCNpilot_cont_300_bf_scaffold_45992
Species: Sorangium cellulosum (50%)
2 1768 bp 68.89 4.68 90.44
SCNpilot_cont_300_bf_scaffold_21355
Species: Sorangium cellulosum (50%)
4 2690 bp 69.33 5.32 90.45
SCNpilot_cont_300_bf_scaffold_2492
Domain: Bacteria (62.5%)
8 9698 bp 68.27 4.66 90.45
SCNpilot_cont_300_bf_scaffold_2761
Phylum: Proteobacteria (71.43%)
14 19360 bp 68.68 5.16 90.48
SCNpilot_cont_300_bf_scaffold_3796
Order: Myxococcales (55.56%)
9 12735 bp 68.75 5.87 90.48
SCNpilot_cont_300_bf_scaffold_5652
Domain: Bacteria (50%)
4 5062 bp 69.95 5.40 90.50
SCNpilot_cont_300_bf_scaffold_6389
Order: Myxococcales (55.56%)
9 9198 bp 69.45 6.06 90.51
SCNpilot_cont_300_bf_scaffold_5378
Phylum: Proteobacteria (66.67%)
9 6122 bp 67.67 4.71 90.51
SCNpilot_cont_300_bf_scaffold_3608
Domain: Bacteria (60%)
20 17729 bp 69.07 5.15 90.51
SCNpilot_cont_300_bf_scaffold_8450
Order: Myxococcales (50%)
6 4526 bp 70.08 5.10 90.54
SCNpilot_cont_300_bf_scaffold_5507
Order: Myxococcales (55.56%)
9 5927 bp 68.30 5.63 90.55
Displaying items 951-1000 of 1703 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.