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SCNpilot_cont_500_bf_scaffold_682

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_682_trna_1
unknown

Not on your lists

1158..1228
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_trna_2
unknown

Not on your lists

1235..1307
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_trna_3
unknown

Not on your lists

1322..1394
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_trna_4
unknown

Not on your lists

1398..1470
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_trna_5
unknown

Not on your lists

1898..1969
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_16S_1
unknown

Not on your lists

2047..3566
DNA (1520bp)
SCNpilot_cont_500_bf_scaffold_682_1
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

3583..6252
DNA (2670bp) protein (890aa)
Cytochrome c oxidase subunit 1+2; EC=1.9.3.1;; Cytochrome c oxidase polypeptide I+II; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
Cox1_2; Cox1_2; K02256 cytochrome c oxidase subunit 1 [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 1+2 n=2 Tax=Eukaryota RepID=COX1_ACACA rbh
SCNpilot_cont_500_bf_scaffold_682_2
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists


6492..7616
DNA (1125bp) protein (375aa)
Ribosomal protein S4, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT04_ACACA rbh
Ribosomal protein S4, mitochondrial; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
SCNpilot_cont_500_bf_scaffold_682_trna_6
unknown

Not on your lists

7629..7697
DNA (69bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_trna_7
unknown

Not on your lists

7714..7784
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_3
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

7812..8594
DNA (783bp) protein (261aa)
NADH-ubiquinone oxidoreductase chain 6; EC=1.6.5.3;; NADH dehydrogenase subunit 6; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Acanthamoeba castellanii RepID=NU6M_ACACA rbh
nad6_2; NADH dehydrogenase subunit 6.2
SCNpilot_cont_500_bf_scaffold_682_4
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

8846..10624
DNA (1779bp) protein (593aa)
NADH-ubiquinone oxidoreductase chain 5; EC=1.6.5.3;; NADH dehydrogenase subunit 5; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Acanthamoeba castellanii RepID=NU5M_ACACA rbh
nad5; NADH dehydrogenase subunit 5
SCNpilot_cont_500_bf_scaffold_682_5
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

10624..12666
DNA (2043bp) protein (681aa)
NADH-ubiquinone oxidoreductase 75 kDa subunit; EC=1.6.5.3;; EC=1.6.99.3;; Complex I-75kD; Short=CI-75kD;; NADH dehydrogenase subunit 11; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like; K03934 NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:1.6.5.3 1.6.99.3]
NADH-ubiquinone oxidoreductase 75 kDa subunit n=1 Tax=Acanthamoeba castellanii RepID=NDUS1_ACACA rbh
SCNpilot_cont_500_bf_scaffold_682_6
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

12809..13798
DNA (990bp) protein (330aa)
Cytochrome c oxidase subunit 3; EC=1.9.3.1;; Cytochrome c oxidase polypeptide III; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
Cytochrome c oxidase subunit 3 n=1 Tax=Acanthamoeba castellanii RepID=COX3_ACACA rbh
cox3; Cox3; K02262 cytochrome c oxidase subunit 3
SCNpilot_cont_500_bf_scaffold_682_7
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

13808..15301
DNA (1494bp) protein (498aa)
NADH-ubiquinone oxidoreductase chain 4; EC=1.6.5.3;; NADH dehydrogenase subunit 4; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
nad4, ndhD; nad4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Acanthamoeba castellanii RepID=NU4M_ACACA rbh
SCNpilot_cont_500_bf_scaffold_682_8
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

15306..16889
DNA (1584bp) protein (528aa)
NADH-ubiquinone oxidoreductase chain 2; EC=1.6.5.3;; NADH dehydrogenase subunit 2; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
nad2; NADH dehydrogenase subunit 2; K03879 NADH-ubiquinone oxidoreductase chain 2 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 2 n=1 Tax=Acanthamoeba castellanii RepID=NU2M_ACACA rbh
SCNpilot_cont_500_bf_scaffold_682_9
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists


16912..17853
DNA (942bp) protein (314aa)
Ribosomal protein S2, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT02_ACACA rbh
Ribosomal protein S2, mitochondrial; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
SCNpilot_cont_500_bf_scaffold_682_10
unknown

Not on your lists

comp(17840..18040)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_682_trna_8
unknown

Not on your lists

17881..17952
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_trna_9
unknown

Not on your lists

17958..18039
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_11
unknown

Not on your lists

comp(18043..18342)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_682_12
unknown

Not on your lists

comp(18345..18599)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_682_13
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

18658..18897
DNA (240bp) protein (80aa)
ATP synthase protein 9; K02128 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit 9, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=ATP9_ACACA
ATP synthase subunit 9, mitochondrial; Lipid-binding protein; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
SCNpilot_cont_500_bf_scaffold_682_trna_10
unknown

Not on your lists

18912..18996
DNA (85bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_14
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

19027..20184
DNA (1158bp) protein (386aa)
Cytochrome b n=1 Tax=Acanthamoeba castellanii RepID=CYB_ACACA rbh
Cytochrome b; Complex III subunit 3; Complex III subunit III; Cytochrome b-c1 complex subunit 3; Ubiquinol-cytochrome-c reductase complex cytochrome b subunit; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
cob; apocytochrome b
SCNpilot_cont_500_bf_scaffold_682_15
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

20522..21721
DNA (1200bp) protein (400aa)
ORF115 n=1 Tax=Acanthamoeba castellanii RepID=Q33665_ACACA
ORF115 {ECO:0000313|EMBL:AAD11833.1}; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
SCNpilot_cont_500_bf_scaffold_682_16
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

21836..23404
DNA (1569bp) protein (523aa)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=ATPA_ACACA rbh
ATP synthase subunit alpha, mitochondrial; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
SCNpilot_cont_500_bf_scaffold_682_17
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

23432..24541
DNA (1110bp) protein (370aa)
NADH-ubiquinone oxidoreductase chain 1; EC=1.6.5.3;; NADH dehydrogenase subunit 1; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
nad1; NADH dehydrogenase subunit 1; K03878 NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Acanthamoeba castellanii RepID=NU1M_ACACA rbh
SCNpilot_cont_500_bf_scaffold_682_trna_11
unknown

Not on your lists

24574..24644
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_682_18
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists


24673..25683
DNA (1011bp) protein (337aa)
60S ribosomal protein L11, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RM11_ACACA rbh
60S ribosomal protein L11, mitochondrial; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;"
Displaying items 1-30 of 53 in total

View Taxonomy