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SCNpilot_cont_500_bf_scaffold_213_62

Organism: SCNpilot_cont_500_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 16
Location: 55331..55621

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3 component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFD6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 96.0
  • Bit_score: 177
  • Evalue 5.60e-42
Type IV secretory pathway, VirB3 component {ECO:0000313|EMBL:EYR82771.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 96.0
  • Bit_score: 177
  • Evalue 7.90e-42
type IV secretory pathway, VirB3-like; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 98.0
  • Bit_score: 67
  • Evalue 3.40e-09

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGCGTGATGATGCACCCGATGTCGAACCGCTCATCCAGCCGCTGACCCGGCCGCCGACATATTTCGGGGTCGACATCATCGTGTTCGTGGTGAACGGCATCTTCGGGATCGTCATCTTCATCGCATCGTCGAGCTTTCTCGCGCCACTGGTCGTCCTGCCGGTTCATTTCATCGGGCTCTACCTCTGCCAGCGCGACATCCACATCGTCCGCGTGGCGCAGGTCTTTCTGTCGATGCGCCGGGCGATCCGTAACCGGCGCTTCTGGAAAGCGGGGAGCTATGCCCCATGA
PROTEIN sequence
Length: 97
MRDDAPDVEPLIQPLTRPPTYFGVDIIVFVVNGIFGIVIFIASSSFLAPLVVLPVHFIGLYLCQRDIHIVRVAQVFLSMRRAIRNRRFWKAGSYAP*