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SCNpilot_cont_500_bf_scaffold_12

Search features with annotation key words

Displaying items 31-60 of 785 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12_31
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34638..35465
DNA (828bp) protein (276aa)
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J0D5_9SPHN rbh
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:EQB15379.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
fumarylacetoacetate (FAA) hydrolase rbh
SCNpilot_cont_500_bf_scaffold_12_32
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35528..37831
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HTE5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB15378.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_12_33
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37894..38739
DNA (846bp) protein (282aa)
esterase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B37CCD rbh
Esterase/lipase {ECO:0000313|EMBL:CCW15697.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
esterase/lipase-like protein rbh
SCNpilot_cont_500_bf_scaffold_12_34
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38736..40046
DNA (1311bp) protein (437aa)
Glycoside hydrolase family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWS5_9SPHN rbh
Glycoside hydrolase family protein {ECO:0000313|EMBL:EJU12498.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
glycoside hydrolase rbh
SCNpilot_cont_500_bf_scaffold_12_35
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40215..40871
DNA (657bp) protein (219aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WX47_9SPHN
DNA, contig: SP630 {ECO:0000313|EMBL:GAN13986.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_12_36
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41006..41629
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I2S5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB19632.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
twin-arginine translocation pathway signal
SCNpilot_cont_500_bf_scaffold_12_37
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41629..43314
DNA (1686bp) protein (562aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDJ8_9SPHN rbh
glucose-methanol-choline oxidoreductase rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:CCA90373.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_500_bf_scaffold_12_38
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43333..44472)
DNA (1140bp) protein (380aa)
Monooxygenase, FAD-binding n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XED7_NOVAD rbh
monooxygenase, FAD-binding rbh
Monooxygenase, FAD-binding {ECO:0000313|EMBL:ABP64298.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_39
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44578..47007
DNA (2430bp) protein (810aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488AC5
TonB-dependent receptor {ECO:0000313|EMBL:EXS71910.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_12_40
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47081..48001
DNA (921bp) protein (307aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XED4_NOVAD rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABP64295.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_41
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48013..49014
DNA (1002bp) protein (334aa)
transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B59A41 rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABP64294.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_42
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49018..49419)
DNA (402bp) protein (134aa)
Transcriptional regulator, HxlR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XED2_NOVAD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABP64293.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_43
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49553..50365
DNA (813bp) protein (271aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KHS43845.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KHS43845.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XED1_NOVAD rbh
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_12_44
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50362..51957
DNA (1596bp) protein (532aa)
Phytoene dehydrogenase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IM66_9SPHN rbh
Phytoene dehydrogenase {ECO:0000313|EMBL:EQB12845.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
amine oxidase rbh
SCNpilot_cont_500_bf_scaffold_12_45
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51957..52184
DNA (228bp) protein (76aa)
UPI0003D6159F related cluster n=1 Tax=unknown RepID=UPI0003D6159F
Phosphoenolpyruvate carboxykinase {ECO:0000313|EMBL:ETI62627.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12_46
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52316..53341
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEC8_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP64289.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_47
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53354..54472
DNA (1119bp) protein (373aa)
Monooxygenase, FAD-binding n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEC7_NOVAD rbh
monooxygenase, FAD-binding rbh
Monooxygenase, FAD-binding {ECO:0000313|EMBL:ABP64288.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_48
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54559..55629
DNA (1071bp) protein (357aa)
UPI0003D5CCAD related cluster n=1 Tax=unknown RepID=UPI0003D5CCAD rbh
Glyoxalase {ECO:0000313|EMBL:ETI62626.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
glyoxalase/bleomycin resistance protein/dioxygenase rbh
SCNpilot_cont_500_bf_scaffold_12_49
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55872..56180)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PJG2_9CAUL
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KHS46129.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
antibiotic biosynthesis monooxygenase; K07145
SCNpilot_cont_500_bf_scaffold_12_50
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56180..56584)
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEC5_NOVAD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABP64286.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_51
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56584..57735)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEC4_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP64285.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_52
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57747..58511)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. LH128 RepID=J8W1V3_9SPHN rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EZP82839.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_12_53
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58508..59839)
DNA (1332bp) protein (444aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
histidinol dehydrogenase (EC:1.1.1.23); K15509 sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] rbh
Histidinol dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEC2_NOVAD rbh
SCNpilot_cont_500_bf_scaffold_12_54
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60004..60948
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HL32_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB12853.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
fumarylacetoacetate (FAA) hydrolase rbh
SCNpilot_cont_500_bf_scaffold_12_55
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60945..61619
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B758AA
Uncharacterized protein {ECO:0000313|EMBL:EQB03810.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
SCNpilot_cont_500_bf_scaffold_12_56
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61624..62160
DNA (537bp) protein (179aa)
Cupin 2 domain-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDZ4_9SPHN rbh
cupin 2 barrel domain-containing protein rbh
Cupin 2 domain-containing protein {ECO:0000313|EMBL:CCA90519.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_500_bf_scaffold_12_57
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

62157..62771
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6BCDF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCNpilot_cont_500_bf_scaffold_12_58
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62768..63517
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEB9_NOVAD rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP64280.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_59
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63518..64231)
DNA (714bp) protein (238aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XED8_NOVAD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP64299.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_12_60
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64224..65444)
DNA (1221bp) protein (407aa)
UPI0003D631FB related cluster n=1 Tax=unknown RepID=UPI0003D631FB rbh
MFS transporter {ECO:0000313|EMBL:ETI62640.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
major facilitator transporter rbh
Displaying items 31-60 of 785 in total

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