name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_12_91
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
98867..99820
|
Porphobilinogen deaminase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WG75_9SPHN
rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
|
|
SCNpilot_cont_500_bf_scaffold_12_92
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
99817..100563
|
Uroporphyrinogen-III synthase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EAH2_9SPHN
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EHJ61609.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_93
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
100560..101486
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYX2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47718.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_12_94
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(101483..102736)
|
2-octaprenyl-6-methoxyphenol hydroxylase (EC:1.14.13.-); K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
rbh
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIS1_9SPHN
rbh
Ubiquinone biosynthesis protein UbiH {ECO:0000313|EMBL:KHK93464.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_95
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(102762..104489)
|
Alkaline phosphatase {ECO:0000256|PIRNR:PIRNR031924}; EC=3.1.3.1 {ECO:0000256|PIRNR:PIRNR031924};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZC46_9SPHN
rbh
type I phosphodiesterase/nucleotide pyrophosphatase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_12_96
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
104622..106709
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I0S3_9SPHN
rbh
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KHK93721.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
cytochrome c biogenesis protein, transmembrane region
rbh
|
|
SCNpilot_cont_500_bf_scaffold_12_97
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(107153..108430)
|
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen-III oxidase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VBG2_9SPHN
|
|
SCNpilot_cont_500_bf_scaffold_12_98
unknown
|
Not on your lists |
comp(108529..108762)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_12_99
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(108759..108932)
|
Cytochrome c oxidase cbb3-type maturation protein CcoS n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMA7_9SPHN
Cytochrome oxidase maturation protein Cbb3 {ECO:0000313|EMBL:KEO86165.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
cbb3-type cytochrome oxidase maturation protein
|
|
SCNpilot_cont_500_bf_scaffold_12_100
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(108929..111076)
|
Heavy metal translocating P-type ATPase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G565_NOVAD
rbh
Type cbb3 cytochrome oxidase biogenesis protein ccoI {ECO:0000313|EMBL:GAO56656.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
heavy metal translocating P-type ATPase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_12_101
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(111092..111589)
|
integral membrane protein linked to a cation pump-like n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E2B7
Scaffold24, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30500.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_12_102
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(111613..113070)
|
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG78_9SPHN
Nitrogen fixation protein FixG {ECO:0000313|EMBL:KHK92269.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
4Fe-4S ferredoxin
|
|
SCNpilot_cont_500_bf_scaffold_12_103
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(113073..114029)
|
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8A6_9SPHN
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cytochrome c oxidase, cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III
|
|
SCNpilot_cont_500_bf_scaffold_12_104
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(114016..114192)
|
cb-type cytochrome c oxidase subunit IV (EC:1.9.3.1); K00407 cytochrome c oxidase cbb3-type subunit IV
Cytochrome c oxidase cbb3-type subunit IV n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMA5_9SPHN
Putative membrane protein {ECO:0000313|EMBL:AJA08069.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_105
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(114189..114950)
|
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8A4_9SPHN
rbh
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EGD59121.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
cytochrome c oxidase cbb3-type subunit II; K00405 cytochrome c oxidase cbb3-type subunit II
rbh
|
|
SCNpilot_cont_500_bf_scaffold_12_106
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(114963..116621)
|
Cytochrome c oxidase subunit ccoN {ECO:0000313|EMBL:GAO56662.1}; EC=1.9.3.1 {ECO:0000313|EMBL:GAO56662.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cb-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
rbh
Cb-type cytochrome c oxidase subunit I n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG74_9SPHN
rbh
|
|
SCNpilot_cont_500_bf_scaffold_12_107
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
117110..117811
|
OmpW n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBX0_9SPHN
Outer membrane protein W {ECO:0000313|EMBL:GAO56663.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
OmpW; K07275 outer membrane protein
|
|
SCNpilot_cont_500_bf_scaffold_12_108
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(117993..118691)
|
CRP/FNR family transcriptional regulator,anaerobic regulatory protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKY8_9SPHN
rbh
CRP/FNR family transcriptional regulator,anaerobic regulatory protein {ECO:0000313|EMBL:EJU11260.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
CRP/FNR family transcriptional regulator,anaerobic regulatory protein; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_12_109
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(119051..119824)
|
RNA polymerase sigma factor for flagellar operon FliA n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIS6_9SPHN
rbh
RNA polymerase sigma factor for flagellar operon FliA; K02405 RNA polymerase sigma factor for flagellar operon FliA
rbh
RNA polymerase sigma factor for flagellar operon FliA {ECO:0000313|EMBL:CCA94144.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_110
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(119821..121956)
|
Flagellar biosynthesis protein FlhA n=2 Tax=Novosphingobium RepID=F6IIS7_9SPHN
rbh
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:CCA94145.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_111
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(121960..122901)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7L2_9SPHN
Phage tail fibers {ECO:0000313|EMBL:GAO55285.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
lytic transglycosylase catalytic subunit subunit
|
|
SCNpilot_cont_500_bf_scaffold_12_112
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(123055..123408)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7L4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59405.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_12_113
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(123412..123735)
|
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000369685E
Uncharacterized protein {ECO:0000313|EMBL:KHS44308.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein; K02398 negative regulator of flagellin synthesis FlgM
|
|
SCNpilot_cont_500_bf_scaffold_12_114
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(123927..124484)
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HXS8_9SPHN
Flagellar protein {ECO:0000313|EMBL:KHS44309.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar protein
|
|
SCNpilot_cont_500_bf_scaffold_12_115
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(124565..125044)
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2G576_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL24845.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_116
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(125041..125718)
|
Flagellar motor component n=1 Tax=Novosphingobium sp. AP12 RepID=J3A1M2_9SPHN
Flagellar motor rotation protein motA {ECO:0000313|EMBL:GAO55280.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
chemotaxis protein MotA; K02556 chemotaxis protein MotA
|
|
SCNpilot_cont_500_bf_scaffold_12_117
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
125975..126337
|
flagellar basal body rod protein FlgB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B49D85
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
|
|
SCNpilot_cont_500_bf_scaffold_12_118
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
126340..126747
|
Flagellar basal-body rod protein FlgC n=2 Tax=Novosphingobium RepID=F6IIT4_9SPHN
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
|
|
SCNpilot_cont_500_bf_scaffold_12_119
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
126747..127097
|
flagellar basal body rod modification protein FlgD n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B605C4
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AEJ83972.1}; TaxID=542 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis.;"
|
|
SCNpilot_cont_500_bf_scaffold_12_120
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
127126..127938
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7M2_9SPHN
Flagellar hook protein FlgE {ECO:0000313|EMBL:KHS44315.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar hook protein FlgE
|