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SCNpilot_cont_500_bf_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 316 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_20_1

Not on your lists

3..164
DNA (162bp) protein (54aa)
Alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:CBI11018.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CBI11018.1};; EC=1.1.1.284 {ECO:0000313|EMBL:CBI11018.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alcohol dehydrogenase (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
Alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6QUU5_9ZZZZ
SCNpilot_cont_500_bf_scaffold_20_2
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166..558)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUX5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR26865.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
cupin
SCNpilot_cont_500_bf_scaffold_20_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(555..1538)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U6_9PROT rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_20_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1621..2319)
DNA (699bp) protein (233aa)
Asp/Glu/Hydantoin racemase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U4_9PROT
Asp/Glu/Hydantoin racemase {ECO:0000313|EMBL:EHL96433.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2377..3489)
DNA (1113bp) protein (371aa)
Oxidoreductase, FAD/FMN-binding protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XF98_9BURK
NADH:flavin oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_cont_500_bf_scaffold_20_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3569..4198
DNA (630bp) protein (210aa)
NIPSNAP family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U5_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_20_7
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4221..5771)
DNA (1551bp) protein (517aa)
Putative thiamine-pyrophosphate-requiring enzyme n=3 Tax=Bordetella bronchiseptica RepID=K4QK46_BORBO
thiamine-pyrophosphate-requiring enzyme
Putative thiamine-pyrophosphate-requiring enzyme {ECO:0000313|EMBL:CCN22192.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_cont_500_bf_scaffold_20_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6817)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL96430.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
extra-cytoplasmic solute receptor family protein 110
SCNpilot_cont_500_bf_scaffold_20_9
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6912..7934
DNA (1023bp) protein (341aa)
BNR/Asp-box repeat protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U2_9PROT rbh
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EHL96431.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7938..8510
DNA (573bp) protein (191aa)
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U3_9PROT
Alkylhydroperoxidase AhpD family core domain protein {ECO:0000313|EMBL:EHL96432.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8518..9297)
DNA (780bp) protein (260aa)
IclR helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U8_9PROT
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_20_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9507..10472
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7V1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL96194.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20_13
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10472..11290
DNA (819bp) protein (273aa)
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U9_9PROT
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:EHL96192.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hpcH/HpaI aldolase
SCNpilot_cont_500_bf_scaffold_20_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11294..12130
DNA (837bp) protein (279aa)
Putative 4-sulfomuconolactone hydrolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7V2_9PROT rbh
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_20_15
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12313..13158
DNA (846bp) protein (282aa)
esterase (EC:3.1.1.1) rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:ETH90414.1}; EC=3.1.2.12 {ECO:0000313|EMBL:ETH90414.1};; TaxID=1331279 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis STO1-CHOC-0019.;"
S-formylglutathione hydrolase n=30 Tax=Bordetella RepID=V8U4G6_BORPT rbh
SCNpilot_cont_500_bf_scaffold_20_16
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13155..14468)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
HAMP domain-containing protein 16 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCJ0_9BURK rbh
two-component system sensor kinase rbh
SCNpilot_cont_500_bf_scaffold_20_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14468..15166)
DNA (699bp) protein (233aa)
Putative two-component system response regulator n=7 Tax=Bordetella RepID=K0MEK8_BORPB
two-component system response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:KDD51003.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_20_18
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15271..17043
DNA (1773bp) protein (591aa)
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2) rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:KCV66478.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KCV66478.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Gamma-glutamyltranspeptidase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QR33_BORBO rbh
SCNpilot_cont_500_bf_scaffold_20_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17227..18822
DNA (1596bp) protein (532aa)
Glucans biosynthesis protein G n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JJL3_PSEST rbh
Glucans biosynthesis protein G {ECO:0000256|HAMAP-Rule:MF_01069}; Flags: Precursor;; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
glucan biosynthesis protein G
SCNpilot_cont_500_bf_scaffold_20_20
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18827..21130
DNA (2304bp) protein (768aa)
Glucans biosynthesis glucosyltransferase H {ECO:0000256|HAMAP-Rule:MF_01072, ECO:0000256|SAAS:SAAS00010833}; EC=2.4.1.- {ECO:0000256|HAMAP-Rule:MF_01072, ECO:0000256|SAAS:SAAS00010802};; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
mdoH; glucosyltransferase MdoH; K03669 membrane glycosyltransferase [EC:2.4.1.-] rbh
glucosyltransferase n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002E4C99D rbh
SCNpilot_cont_500_bf_scaffold_20_21
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21156..21611
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLY0_MESCW
Uncharacterized protein {ECO:0000313|EMBL:KHJ54533.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20_22
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21625..21936)
DNA (312bp) protein (104aa)
Beta-lactamase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXH8_9BURK
Beta-lactamase {ECO:0000313|EMBL:ETF04043.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20_23
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21962..23308)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QYH0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF04044.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_20_24
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23313..24272)
DNA (960bp) protein (320aa)
ABC transporter substrate-binding protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXM1_9BURK rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETF04045.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
bug; ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_20_25
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24374..25264
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVV5_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETF04046.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_20_26
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25272..26462)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037A6759 rbh
Bicyclomycin resistance protein {ECO:0000313|EMBL:ELX09289.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
drug resistance transporter, bcr/cfla subfamily; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_cont_500_bf_scaffold_20_27
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26710..29082
DNA (2373bp) protein (791aa)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family {ECO:0000313|EMBL:KCB35250.1}; EC=1.1.-.- {ECO:0000313|EMBL:KCB35250.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
Quinate dehydrogenase n=2 Tax=Bordetella holmesii RepID=M5NKA4_9BORD rbh
quinate dehydrogenase (Pyrroloquinoline-quinone)
SCNpilot_cont_500_bf_scaffold_20_28
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29150..30097
DNA (948bp) protein (316aa)
Pca operon transcription factor PcaQ n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0ART1_BURTH
pcaQ; pca operon transcription factor PcaQ
LysR family transcriptional regulator {ECO:0000313|EMBL:AIP65739.1}; TaxID=57975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis.;"
SCNpilot_cont_500_bf_scaffold_20_29
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30220..30951
DNA (732bp) protein (244aa)
pcaH; protocatechuate 3,4-dioxygenase subunit beta (EC:1.13.11.3); K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] rbh
Protocatechuate 3,4-dioxygenase beta chain n=2 Tax=Acinetobacter ursingii RepID=N9BZ77_9GAMM rbh
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KDP85560.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
SCNpilot_cont_500_bf_scaffold_20_30
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30966..31607
DNA (642bp) protein (214aa)
pcaG; protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] rbh
Protocatechuate 3,4-dioxygenase, alpha chain {ECO:0000313|EMBL:CCA79047.1}; EC=1.13.11.3 {ECO:0000313|EMBL:CCA79047.1};; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
Protocatechuate 3,4-dioxygenase, alpha chain n=2 Tax=Ralstonia RepID=D8NTX3_RALSL rbh
Displaying items 1-30 of 316 in total

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