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SCNpilot_cont_500_bf_scaffold_20

Search features with annotation key words

Displaying items 121-150 of 316 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_20_121
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130211..132292)
DNA (2082bp) protein (694aa)
5-oxoprolinase (EC:3.5.2.14); K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABE33494.1}; EC=3.5.2.14 {ECO:0000313|EMBL:ABE33494.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QZ5_BURXL rbh
SCNpilot_cont_500_bf_scaffold_20_122
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132372..133784)
DNA (1413bp) protein (471aa)
putative aldehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:ABE33493.1}; EC=1.2.1.16 {ECO:0000313|EMBL:ABE33493.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Putative aldehyde dehydrogenase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QZ6_BURXL rbh
SCNpilot_cont_500_bf_scaffold_20_123
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133797..134411)
DNA (615bp) protein (205aa)
Decarboxylase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QZ7_BURXL rbh
hypothetical protein rbh
Decarboxylase {ECO:0000313|EMBL:ABE33492.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_500_bf_scaffold_20_124
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134423..134974)
DNA (552bp) protein (184aa)
putative decarboxylase (EC:4.1.1.-); K01618 [EC:4.1.1.-]
Putative decarboxylase {ECO:0000313|EMBL:ABE33491.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABE33491.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Putative decarboxylase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QZ8_BURXL
SCNpilot_cont_500_bf_scaffold_20_125
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135312..136307
DNA (996bp) protein (332aa)
putative zinc-containing alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1] rbh
Putative zinc-containing alcohol dehydrogenase {ECO:0000313|EMBL:ABE33473.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ABE33473.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Putative zinc-containing alcohol dehydrogenase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13R16_BURXL rbh
SCNpilot_cont_500_bf_scaffold_20_126
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136304..137830
DNA (1527bp) protein (509aa)
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13R15_BURXL rbh
putative long-chain-fatty-acid--CoA ligase rbh
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ABE33474.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_500_bf_scaffold_20_127
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137878..138282
DNA (405bp) protein (135aa)
Phenylacetic acid degradation-related protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13R14_BURXL
phenylacetic acid degradation-like protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_500_bf_scaffold_20_128
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138279..139292)
DNA (1014bp) protein (338aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXU5_BORPD rbh
bug6; hypothetical protein rbh
Putative secreted protein {ECO:0000313|EMBL:CAP40590.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_500_bf_scaffold_20_129
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139490..140491
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1E8D8_9BURK
putative Bug-like extra-cytoplasmic solute receptor, TTT family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_cont_500_bf_scaffold_20_130
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140518..141327
DNA (810bp) protein (270aa)
Class II aldolase and adducin N-terminal domain-containing protein 4 n=2 Tax=Bordetella holmesii RepID=M5NPW3_9BORD
Class II aldolase/adducin N-terminal domain protein {ECO:0000313|EMBL:KCB40591.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
class II aldolase and adducin N-terminal domain-containing protein 4
SCNpilot_cont_500_bf_scaffold_20_131
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141344..142279
DNA (936bp) protein (312aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=3 Tax=Azotobacter vinelandii RepID=C1DKB6_AZOVD rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE23197.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
D-isomer specific 2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_20_132
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142302..143132
DNA (831bp) protein (277aa)
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Hydroxypyruvate isomerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221V8_RHOFD
SCNpilot_cont_500_bf_scaffold_20_133
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143098..143988)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XNI7_VARPD rbh
transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU53680.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_20_134
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144015..144668)
DNA (654bp) protein (218aa)
Phosphoglycerate mutase n=1 Tax=Achromobacter piechaudii HLE RepID=J4PH60_9BURK
Phosphoglycerate mutase {ECO:0000313|EMBL:EJO33147.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
Hypothetical, related to broad specificity phosphatases COG0406
SCNpilot_cont_500_bf_scaffold_20_135
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144661..145311)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I289_BORPD rbh
hypothetical protein; K06910 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP40945.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_500_bf_scaffold_20_136
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145352..146629)
DNA (1278bp) protein (426aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
Tyrosyl-tRNA synthetase (EC:6.1.1.1) rbh
UPI0003D615FF related cluster n=1 Tax=unknown RepID=UPI0003D615FF rbh
SCNpilot_cont_500_bf_scaffold_20_137
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146893..148344
DNA (1452bp) protein (484aa)
Putative uncharacterized protein n=2 Tax=Achromobacter xylosoxidans C54 RepID=E5UD44_ALCXX rbh
Peptidase, M23 family {ECO:0000313|EMBL:KCV66751.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_20_138
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148355..149464
DNA (1110bp) protein (370aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-); K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] rbh
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000361840A rbh
SCNpilot_cont_500_bf_scaffold_20_139
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149716..150660
DNA (945bp) protein (315aa)
2-nitropropane dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S2Y5_9BURK
2-nitropropane dioxygenase {ECO:0000313|EMBL:EHP43200.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
probable nitronate monooxygenase-like
SCNpilot_cont_500_bf_scaffold_20_140
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150686..151876
DNA (1191bp) protein (397aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11Z73_POLSJ
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:KFC65309.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_500_bf_scaffold_20_141
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151871..152374)
DNA (504bp) protein (168aa)
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLB3_VEREI
Small subunit naph/bph dioxygenase {ECO:0000313|EMBL:ETY84106.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
aromatic-ring-hydroxylating dioxygenase subunit beta
SCNpilot_cont_500_bf_scaffold_20_142
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152388..153710)
DNA (1323bp) protein (441aa)
Dioxygenase hydroxylase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HM41_9GAMM
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:ETY84107.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
ring-hydroxylating dioxygenase large subunit
SCNpilot_cont_500_bf_scaffold_20_143
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153733..154509)
DNA (777bp) protein (259aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ETY84108.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ETY84108.1};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SXP1_9RHIZ
putative 3-oxoacyl-[acyl-carrier-protein] reductase
SCNpilot_cont_500_bf_scaffold_20_144
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154527..155498)
DNA (972bp) protein (324aa)
Candidate extracytoplasmic binding receptor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y191_RAMTT
tctC; extracytoplasmic binding receptor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_cont_500_bf_scaffold_20_145
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155572..155889)
DNA (318bp) protein (106aa)
2-hydroxybenzoate 5-hydroxylase ferredoxin n=1 Tax=Ralstonia sp. PBA RepID=I9KQ00_9RALS
Uncharacterized protein {ECO:0000313|EMBL:ETY84109.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
ferredoxin component NahAb of naphthalene dioxygenase
SCNpilot_cont_500_bf_scaffold_20_146
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155901..157199)
DNA (1299bp) protein (433aa)
Nitrite reductase NADPH large subunit n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G272_RALS8
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFX30108.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
nirB; nitrite reductase NADPH large subunit
SCNpilot_cont_500_bf_scaffold_20_147
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157196..158605)
DNA (1410bp) protein (470aa)
2-methylcitrate dehydratase (EC:4.2.1.79); K01720 2-methylcitrate dehydratase [EC:4.2.1.79]
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SXL3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETY84111.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
SCNpilot_cont_500_bf_scaffold_20_148
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(158663..159460)
DNA (798bp) protein (266aa)
putative aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Glaciibacter superstes RepID=UPI0003B5905B
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_cont_500_bf_scaffold_20_149
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159703..160497
DNA (795bp) protein (265aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V3M2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETY84095.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_20_150
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160508..162448)
DNA (1941bp) protein (647aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:AIO40079.1}; EC=3.6.3.41 {ECO:0000313|EMBL:AIO40079.1};; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
ABC transporter (EC:3.6.1.3)
ABC transporter ATP-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036740DE
Displaying items 121-150 of 316 in total

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