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SCNpilot_cont_500_bf_scaffold_20_133

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(143098..143988)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XNI7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 1.10e-104
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 3.40e-105
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU53680.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 1.50e-104

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGGATCTCAAGCAACTCGAATATTTCGTGAGCGTGGCCGAACTGGGCGGTTTCACGCGGGCTTCCATCGCGCTCGACATCGCGCAGCCCGCGCTGAGCCGGCAGGTGCGCCAGCTCGAGATCGAGCTGGGGCAGAGCCTGCTCAGGCGCACCGGACGCGGCGTGGTGCCTACCGAGGCAGGCAAGATGCTGCTCGAACACGGACGGGGCATCCTGCACCAGGTCGCGCGCACGCGCGAGGAGCTTGGGCGGTTGCGCGGCGCCCTGGCCGGCCGGGTGGCGATCGGCCTGCCGCCCCGCTTCGCCAAGATGCTGACCGTGCCGCTGACCCGTGCCGTGCGGGCGCAACTGCCCGAGGCGGCGCTGTCCATTTCCGAAAGTCTTTCGACAGGCCTGCAGGAATCGCTGCAAAGCGGCCGGCTGGACATCGCCCTGTTGTACAACCCGGCGCCGTCGCCCGACATCGACAGCGTCGTGCTGCTGGAAGAGGACTTCTACCTGGTCACCCGCCGCGGCGGGCGGGCGCGCAAGTCGGTCAGCGTGCGCGAACTGGCCGACGAGCCCCTGGTGATTCCGACCCGGCCCAACACCATACGCATGCTGGTCGAGGCTGAACTGGCCAACATCGGGCTGCATCCGCGCATCGCCATGGAGATAGACGGGGTGGCGGCCATGCTCGATCTGGTCGCCGAGGGCGTGGGGGCCGCGGTGCTGTCGGTCAATGCCGTGCGCACGTCCGGCCGCGAGGAAGTGTTCCGCGCGGTGCCCATCGTCAAGCCGCGCCTGCGCAGCAAGCTGGCGCTGGCGGTCAGCGCGCAGCGGCCCGCCACGCGCACGCAGCAGGCCATGCAGGACATCATCCGCGAACTGGTGCTGGGCCTGGGCATGTAG
PROTEIN sequence
Length: 297
VDLKQLEYFVSVAELGGFTRASIALDIAQPALSRQVRQLEIELGQSLLRRTGRGVVPTEAGKMLLEHGRGILHQVARTREELGRLRGALAGRVAIGLPPRFAKMLTVPLTRAVRAQLPEAALSISESLSTGLQESLQSGRLDIALLYNPAPSPDIDSVVLLEEDFYLVTRRGGRARKSVSVRELADEPLVIPTRPNTIRMLVEAELANIGLHPRIAMEIDGVAAMLDLVAEGVGAAVLSVNAVRTSGREEVFRAVPIVKPRLRSKLALAVSAQRPATRTQQAMQDIIRELVLGLGM*