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SCNpilot_cont_500_bf_scaffold_114

Search features with annotation key words

Displaying items 61-90 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_114_60
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71128..71643
DNA (516bp) protein (172aa)
Putative acetyltransferase {ECO:0000313|EMBL:BAK68543.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAK68543.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F8595D
putative acetyltransferase
SCNpilot_cont_500_bf_scaffold_114_61
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71630..73705)
DNA (2076bp) protein (692aa)
Gluconolactonase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BEC0_9XANT
Gluconolaconase {ECO:0000313|EMBL:KGK56484.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
SMP-30/gluconolaconase/LRE domain-containing protein
SCNpilot_cont_500_bf_scaffold_114_62
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73915..75738
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1R2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48419.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_114_63
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76049..76426)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GT34_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL33515.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_114_64
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76423..77700)
DNA (1278bp) protein (426aa)
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein (EC:1.8.2.1); K07147
Sulfite oxidase-like oxidoreductase n=1 Tax=Novosphingobium sp. AP12 RepID=J3ALC2_9SPHN
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:EJL33516.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
SCNpilot_cont_500_bf_scaffold_114_65
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77783..78547)
DNA (765bp) protein (255aa)
phytanoyl-CoA dioxygenase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B54BB6
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:AJA07759.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
SCNpilot_cont_500_bf_scaffold_114_66
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78651..79574
DNA (924bp) protein (308aa)
Regulator of octopine catabolism/uptake operon (LysR family) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX80_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AJA07758.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
occR; regulator of octopine catabolism/uptake operon (LysR family)
SCNpilot_cont_500_bf_scaffold_114_67
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79756..82074
DNA (2319bp) protein (773aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002889CDF rbh
Outer membrane receptor protein {ECO:0000313|EMBL:AJA07757.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_114_68
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82138..83790
DNA (1653bp) protein (551aa)
medium-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1734D
3-methylmercaptopropionyl-CoA ligase {ECO:0000313|EMBL:GAO53411.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_cont_500_bf_scaffold_114_69
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83780..85789
DNA (2010bp) protein (670aa)
Alpha-glucosidase {ECO:0000313|EMBL:AJA07756.1}; EC=3.2.1.20 {ECO:0000313|EMBL:AJA07756.1};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
yihQ; Alpha-glucosidase YihQ (EC:3.2.1.20)
Family 31 glycosyl hydrolase, alpha-glucosidase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCG0_RHILT rbh
SCNpilot_cont_500_bf_scaffold_114_70
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85735..86664)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B52E9E
putative transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_114_71
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86718..88289
DNA (1572bp) protein (524aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Glycerol-3-phosphate dehydrogenase n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L200_9GAMM rbh
glycerol-3-phosphate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_114_72
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88291..89694
DNA (1404bp) protein (468aa)
FAD/FMN-containing dehydrogenase; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
Alkylglycerone-phosphate synthase n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L1Z9_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_114_73
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89687..91105
DNA (1419bp) protein (473aa)
glpK; glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL66_9SPHN
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_114_74
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91111..91950)
DNA (840bp) protein (280aa)
AP endonuclease, family 2 n=1 Tax=Pseudomonas synxantha BG33R RepID=I4L5Z9_9PSED
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_114_75
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92074..93240
DNA (1167bp) protein (389aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWE1_SPHAL rbh
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:KGB55180.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
iron-containing alcohol dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_114_76
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93262..94335)
DNA (1074bp) protein (358aa)
alkanesulfonate monooxygenase (EC:1.14.14.5); K04091 alkanesulfonate monooxygenase [EC:1.14.14.5]
alkanesulfonate monooxygenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD633
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:AJA07749.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCNpilot_cont_500_bf_scaffold_114_77
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94332..95234)
DNA (903bp) protein (301aa)
aldo/keto reductase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C9608 rbh
Putative oxidoreductase {ECO:0000313|EMBL:AJA07748.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
aldo/keto reductase
SCNpilot_cont_500_bf_scaffold_114_78
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95293..96537)
DNA (1245bp) protein (415aa)
MFS transporter n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003786C19
major facilitator transporter; K08191 MFS transporter, ACS family, hexuronate transporter
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_114_79
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96637..97650)
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9361 rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_114_80
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97917..98171)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDE6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75149.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_114_81
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98273..99421)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4E42B rbh
Uncharacterized protein {ECO:0000313|EMBL:EUC16338.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_114_82
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99427..100863)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7B370 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK23623.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_114_83
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100924..101367)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B51990
Uncharacterized protein {ECO:0000313|EMBL:GAJ30415.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
putative integral membrane protein
SCNpilot_cont_500_bf_scaffold_114_84
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101368..101760)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6B558
Uncharacterized protein {ECO:0000313|EMBL:GAJ30414.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
SCNpilot_cont_500_bf_scaffold_114_85
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101753..102307)
DNA (555bp) protein (185aa)
RNA polymerase sigma24 factor n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B40DC5
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_114_86
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102348..102740)
DNA (393bp) protein (131aa)
signal transduction protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7AFA8
Acid shock protein {ECO:0000313|EMBL:GAJ30412.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
putative signal transduction protein with EFhand domain
SCNpilot_cont_500_bf_scaffold_114_87
unknown

Not on your lists

comp(102892..103152)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_114_88
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103149..104609)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003729748 rbh
PepSY-associated TM helix domain-containing protein rbh
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ACI52332.1}; Putative membrane protein {ECO:0000313|EMBL:CAP57654.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_114_89
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104606..104902)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035CA7CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50388.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Displaying items 61-90 of 135 in total

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