ggKbase home page

SCNpilot_cont_500_bf_scaffold_2256

Search features with annotation key words

Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2256_31
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32291..33097)
DNA (807bp) protein (269aa)
glutamine ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
Glutamine abc transporter, ATP-binding protein n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H1M1_PSESX rbh
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHL34982.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;"
SCNpilot_cont_500_bf_scaffold_2256_32
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33090..34760)
DNA (1671bp) protein (557aa)
FAD-binding monooxygenase n=1 Tax=Rhodococcus opacus RepID=UPI00029CAD97
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:KGH48724.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2256_33
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34902..35918)
DNA (1017bp) protein (339aa)
hypothetical protein; K01777 proline racemase [EC:5.1.1.4]
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI0003735DF1
Uncharacterized protein {ECO:0000313|EMBL:BAK33237.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_500_bf_scaffold_2256_34
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36027..37151)
DNA (1125bp) protein (375aa)
UPI0003CE7EA2 related cluster n=1 Tax=unknown RepID=UPI0003CE7EA2 rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY62192.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_2256_35
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37619..38575
DNA (957bp) protein (319aa)
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein n=2 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CX0_RHILO rbh
ribose ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein rbh
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:CDX19466.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_2256_36
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38621..40303
DNA (1683bp) protein (561aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
Sugar (D-ribose) ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7C8_9RHIZ rbh
Sugar (D-ribose) ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHH12430.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_2256_37
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41301..42008
DNA (708bp) protein (236aa)
UPI0003CE9CBC related cluster n=1 Tax=unknown RepID=UPI0003CE9CBC rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESW90123.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_2256_38
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42017..42595
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036C8405
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AID33814.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
pteridine reductase
SCNpilot_cont_500_bf_scaffold_2256_39
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42932..43372
DNA (441bp) protein (147aa)
Aldose 1-epimerase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y435_MESOW
Aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEH85012.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2256_40
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43389..43730)
DNA (342bp) protein (114aa)
short-chain dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000364371C
Short chain dehydrogenase family protein {ECO:0000313|EMBL:AID33820.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_2256_41
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44056..45618)
DNA (1563bp) protein (521aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI00036E0692 rbh
ABC transporter family protein {ECO:0000313|EMBL:AID33821.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2256_42
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45714..46688)
DNA (975bp) protein (325aa)
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y432_MESOW rbh
sugar ABC transporter substrate-binding protein rbh
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:AID33822.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2256_43
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46778..47059)
DNA (282bp) protein (94aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037834C1
inner-membrane translocator; K10440 ribose transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:AEH85008.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2256_44
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47050..47706)
DNA (657bp) protein (219aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037834C1
inner-membrane translocator; K10440 ribose transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:AEH85008.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2256_45
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48033..49064
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003743564 rbh
Periplasmic binding s and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:AID33825.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor rbh
SCNpilot_cont_500_bf_scaffold_2256_46
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49087..50274)
DNA (1188bp) protein (396aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y429_MESOW rbh
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:AID33826.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_500_bf_scaffold_2256_47
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50271..51269)
DNA (999bp) protein (333aa)
transketolase central subunit; K00615 transketolase [EC:2.2.1.1] rbh
Transketolase central region n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y428_MESOW rbh
Transketolase central region {ECO:0000313|EMBL:AEH85005.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2256_48
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51266..52114)
DNA (849bp) protein (283aa)
transketolase domain-containing protein; K00615 transketolase [EC:2.2.1.1] rbh
transketolase n=1 Tax=Rhizobium loti RepID=UPI0003625118 rbh
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:AID33828.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2256_49
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52123..52938)
DNA (816bp) protein (272aa)
UPI0003CF0749 related cluster n=1 Tax=unknown RepID=UPI0003CF0749 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESW90131.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_2256_50
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53079..54362
DNA (1284bp) protein (428aa)
dehydratase n=1 Tax=Rhizobium loti RepID=UPI0003791360 rbh
Mandelate racemase / muconate lactonizing enzyme {ECO:0000313|EMBL:AID33830.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_500_bf_scaffold_2256_51
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54525..55874
DNA (1350bp) protein (450aa)
dehydrogenase E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037225DE
Dehydrogenase E1 component {ECO:0000313|EMBL:CDX32862.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Displaying items 31-51 of 51 in total

View Taxonomy