ggKbase home page

SCNpilot_cont_500_bf_scaffold_2256_44

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(47050..47706)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037834C1 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 153.0
  • Bit_score: 254
  • Evalue 1.10e-64
inner-membrane translocator; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 153.0
  • Bit_score: 252
  • Evalue 9.80e-65
Inner-membrane translocator {ECO:0000313|EMBL:AEH85008.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 153.0
  • Bit_score: 252
  • Evalue 4.40e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGAACAGCGCGGCAGAGGCGAACGCGCGGCCGGGGGACGTCCAGTCCCTGCGGCGGCGATTGATCGGGTTCATCGCGGTCGGCGAGGTCGGCGTTCTCGCCGCCATGGCGCTGCTGGTCGCGTTCTTCTGGCTGCTGGAGCCGGCCTTCCTGTCGGAGCGTAACATCCGCGCCATCCTCAACGTCGTCTCGTTCGTCGGCATCATCGCGATCGGCCAGACCGTTCTGCTGGTGGCGGGAGAGTTCGATCTCTCGGTCGGCTCGGTCGCCGGCCTTTCGGCCGTCGTCTCCGCCAAGCTGATGACGGCGGCAGCGCTGCCGGTTCCGCTCGCCCTTCTCGGCGGCGTCGGCGTCGGCGCGCTGGTCGGGCTGGTCAACGGCCTGATCGTCGTCAAGCTGCGCATTCCCGCCTTCATCCAGACGCTCGGCATGCTGTTCATCGGCCAGGGCCTGATCCAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCGTCGCACGGTGCTGGGGCGCAACATGTACGCCACCGGCGGCAATCAGGAAGTGGCCCGCCTCGTCGGCATCAACACCGATGCCTACAAGATCGGCGCCTTCATCGCCGTCGGCGCGCTCGCCGCGATCGCCGGCATGTTCGTGA
PROTEIN sequence
Length: 219
MNSAAEANARPGDVQSLRRRLIGFIAVGEVGVLAAMALLVAFFWLLEPAFLSERNIRAILNVVSFVGIIAIGQTVLLVAGEFDLSVGSVAGLSAVVSAKLMTAAALPVPLALLGGVGVGALVGLVNGLIVVKLRIPAFIQTLGMLFIGQGLIQXXXXXXXXXXXXXXXXXCVARCWGATCTPPAAIRKWPASSASTPMPTRSAPSSPSARSPRSPACS*