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SCNpilot_cont_500_bf_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_348_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2172
DNA (2172bp) protein (724aa)
Acriflavin resistance protein D n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU4_9GAMM
cation/multidrug efflux pump
Acriflavin resistance protein D {ECO:0000313|EMBL:EIL98145.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_348_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2300..5437
DNA (3138bp) protein (1046aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLA9_9GAMM rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EIL88000.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cation/multidrug efflux pump rbh
SCNpilot_cont_500_bf_scaffold_348_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5689..7410
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCC5_9GAMM rbh
phosphoglycerol transferase family protein, alkaline phosphatase superfamily rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_348_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7418..8128
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLX3_9GAMM rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:AGG90689.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_348_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8125..9387
DNA (1263bp) protein (421aa)
Sterol desaturase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLZ3_9GAMM rbh
sterol desaturase rbh
Sterol desaturase {ECO:0000313|EMBL:AGG90688.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_348_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9439..10878
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037F36D1 rbh
Amino acid permease {ECO:0000313|EMBL:AIF46065.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
amino acid transporter rbh
SCNpilot_cont_500_bf_scaffold_348_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10970..12895
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C23F5 rbh
Peptidase M61 {ECO:0000313|EMBL:KGI76798.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
glycyl aminopeptidase
SCNpilot_cont_500_bf_scaffold_348_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13096..15042
DNA (1947bp) protein (649aa)
Glycyl aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIB1_9GAMM rbh
glycyl aminopeptidase rbh
Glycyl aminopeptidase {ECO:0000313|EMBL:AGG90685.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_348_trna_1
unknown

Not on your lists

15225..15298
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_348_9
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15476..16132)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKN5_BEII9 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB95074.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_348_10
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16132..17004)
DNA (873bp) protein (291aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKN4_BEII9
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB95073.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_348_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17001..17960)
DNA (960bp) protein (320aa)
UPF0276 protein Bind_1430 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKN1_BEII9 rbh
hypothetical protein; K09930 hypothetical protein rbh
UPF0276 protein Bind_1430 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_348_12
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18030..18362)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKN0_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB95069.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_348_13
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18600..18908)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SWL8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDM60622.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCNpilot_cont_500_bf_scaffold_348_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19118..20761
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F68A0F rbh
Copper oxidase {ECO:0000313|EMBL:AHX15242.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative multicopper oxidase rbh
SCNpilot_cont_500_bf_scaffold_348_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20960..22999
DNA (2040bp) protein (680aa)
phospholipase C; K01114 phospholipase C [EC:3.1.4.3] rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00035E3AF0 rbh
Phosphoesterase {ECO:0000313|EMBL:AHX15241.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_500_bf_scaffold_348_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23062..23550
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F534BA
Uncharacterized protein {ECO:0000313|EMBL:AHX16448.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_348_17
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23735..26137
DNA (2403bp) protein (801aa)
TonB-dependent receptor n=4 Tax=root RepID=B5ERH1_ACIF5 rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACH85017.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
SCNpilot_cont_500_bf_scaffold_348_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26197..26748)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95346.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_348_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26841..27677)
DNA (837bp) protein (279aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG0_9GAMM rbh
7-cyano-7-deazaguanine reductase rbh
SCNpilot_cont_500_bf_scaffold_348_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27781..29763
DNA (1983bp) protein (661aa)
Peptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG1_9GAMM rbh
Peptidase {ECO:0000313|EMBL:EIL89102.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Aminopeptidase N rbh
SCNpilot_cont_500_bf_scaffold_348_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29824..30498)
DNA (675bp) protein (225aa)
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] rbh
Type 12 methyltransferase n=3 Tax=Pseudomonas RepID=L1LWK1_PSEPU rbh
Type 12 methyltransferase {ECO:0000313|EMBL:EKX83054.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
SCNpilot_cont_500_bf_scaffold_348_22
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30495..31415)
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=U8NGX0_PSEAI rbh
Putative pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EKX83055.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
thioredoxin reductase rbh
SCNpilot_cont_500_bf_scaffold_348_23
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31418..31864)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=U8NKJ4_PSEAI
Putative transcriptional regulator {ECO:0000313|EMBL:EKX83056.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
BadM/Rrf2 family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_348_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31947..32939)
DNA (993bp) protein (331aa)
Aldo/keto reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG2_9GAMM rbh
Aldo/keto reductase {ECO:0000313|EMBL:EIL89103.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
SCNpilot_cont_500_bf_scaffold_348_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33044..33946
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG3_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL89104.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_348_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33951..34703)
DNA (753bp) protein (251aa)
Putative glutathione S-transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A1_9GAMM rbh
Putative glutathione S-transferase {ECO:0000313|EMBL:EIL95342.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase rbh
SCNpilot_cont_500_bf_scaffold_348_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34795..35184)
DNA (390bp) protein (130aa)
Acyl-CoA hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG5_9GAMM
Acyl-CoA hydrolase {ECO:0000313|EMBL:EIL89106.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl-CoA hydrolase
SCNpilot_cont_500_bf_scaffold_348_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35362..37707
DNA (2346bp) protein (782aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI99_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AGG90675.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
SCNpilot_cont_500_bf_scaffold_348_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37977..39920)
DNA (1944bp) protein (648aa)
Antirepressor regulating drug resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIE7_9GAMM rbh
antirepressor regulating drug resistance protein rbh
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGG90674.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 116 in total

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