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SCNpilot_cont_500_bf_scaffold_4463_10

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(12558..14018)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E8393F similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 483.0
  • Bit_score: 668
  • Evalue 6.90e-189
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:AHY58525.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 477.0
  • Bit_score: 676
  • Evalue 3.50e-191
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 481.0
  • Bit_score: 663
  • Evalue 4.10e-188
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGTATTGCGCGCGATGAAAAAGACCTCCTCCTCCCTGCCCCTCGAGATCAGGGCCAGCGCCCGCCATCCGCTGGGCATGCCCGCCGAGCGCTTCCTGCGCGACTACTGGCAGAAGCGCCCGTTGCTGATCCGTGGCGCGTTCCCGGATTTCCAGACCCCGGTGATGCCCGAAGACCTGGCCGGGCTGGCCTGCGAAGAAGGCTCGCTGGCGCGCCTGGTCACCCACGACCGCGCCACCGACGGCTGGACGCTGCGCAACGGCCCGTTCCGCGAAGAGGATTTCCCGGGCATGCCCGACCACGACTGGACCCTGCTGGTGCAGGACGTGGACAAATGGGACCCGGACGTGCGCGCGCTGATCGAGCACTTCAACTTCCTGCCGCGCTGGCGCATGGACGACGTGATGATCAGCTTCGCCGCCACCGGCGGCTCGGTCGGCGCCCATGTCGACCAGTACGACGTATTCCTGCTGCAGGCCCACGGCCACCGCCGCTGGCAGATCGACGCCAGTGAATCGACCAAAGGCAAGCGCCCGCCGCTGGATTTCCGCCCCGACGTCGAACTGAAGCTGCTGCGCAAGTTCAAGCCGACCCACGACTGGGTGCTGGAACCGGGCGACATGCTGTACCTGCCGCCGAACGTGCCGCACCACGGCGTCGCCGAAGACCCCTGCCTGACGTTCTCCTTCGGCATGCGCGCGCCGTCCTCGGCCGAGCTGATCAGCGACTGGCTGGATGACCTGGTGGCCGACGCCGACGAGGCCATCCGCTACCAGGACCCGGACCTGAAGCTGCCGGAAGACCCCAACGAGATCGACGCGGCAGCGATGAAGCGCGTGGTCACCGCGCTCAATGCGCTGCGCATGAACGACCCCGACCGCCTGGGCGACTGGTTCGGCCGCTTCATCACCACCTACCGCGCCGCCGGCGACATCCTGCCCTCGCAGGCCCCGCCCGCCCCCACGGACGTGGACGGGGTGCTGGACGAGGGTGGCCTGCTCGAACGCCATCCGTGGGCGCGGCTGGCCTGGCGTCGCGCCACCCGCGGCGCCGTGCTGTACAGCAGCGGCCATGCCTTCCCGTTGCCGGTCAAGGACGCGCAGGGCCTGGCCGCGGCCGAACGGATCGATGCGCCGCTGTTCCGCAAGTTGTCGGCCAAGGGCCGCAGCGCGGTGATGGAACTGCTTGCCGGCGGCCACTACCAGTTGCTCGACGCCGAGACCCTGGCGGCGATGCAGGCCGAGCAGGACGCGCTCGACGTCATGGAAGAAGCGTTCGATGACGCGTTCGACGAGGAAGCCGACGCACCCGAGCTGGAAATCGAGGTGTTCGAGTACGCCCAGGCCGGCGAAGGCGAGCCGGCCAGCGGCGCCATCGACACCGTGCAGGTGAACGAGGAAGGCGTCGAGGTCGTGGTGATCTGCGACGACGGCGACGACGAGGACGGCCCGGCGGCATGA
PROTEIN sequence
Length: 487
MVLRAMKKTSSSLPLEIRASARHPLGMPAERFLRDYWQKRPLLIRGAFPDFQTPVMPEDLAGLACEEGSLARLVTHDRATDGWTLRNGPFREEDFPGMPDHDWTLLVQDVDKWDPDVRALIEHFNFLPRWRMDDVMISFAATGGSVGAHVDQYDVFLLQAHGHRRWQIDASESTKGKRPPLDFRPDVELKLLRKFKPTHDWVLEPGDMLYLPPNVPHHGVAEDPCLTFSFGMRAPSSAELISDWLDDLVADADEAIRYQDPDLKLPEDPNEIDAAAMKRVVTALNALRMNDPDRLGDWFGRFITTYRAAGDILPSQAPPAPTDVDGVLDEGGLLERHPWARLAWRRATRGAVLYSSGHAFPLPVKDAQGLAAAERIDAPLFRKLSAKGRSAVMELLAGGHYQLLDAETLAAMQAEQDALDVMEEAFDDAFDEEADAPELEIEVFEYAQAGEGEPASGAIDTVQVNEEGVEVVVICDDGDDEDGPAA*