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SCNpilot_cont_500_bf_scaffold_4463_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(14062..16314)

Top 3 Functional Annotations

Value Algorithm Source
Putative signaling protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B7J9_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 726.0
  • Bit_score: 968
  • Evalue 5.00e-279
  • rbh
Putative signaling protein {ECO:0000313|EMBL:GAD62833.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 726.0
  • Bit_score: 968
  • Evalue 7.00e-279
GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 727.0
  • Bit_score: 902
  • Evalue 8.10e-260
  • rbh

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Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2253
ATGGGTGCCGTCGACACACTGCAGGAGCTGATGCGGCGCATTGGCCTGGGGCAGGCAGAGATCAGTGAACGCGGCCGCCTGCTGGAATGGCGGCAGGACGATGCGCAGCGCCTGAACGAAAACGCCGCGCGCATGGCCGACGCGCAGGCCGCCTTCATCGAGCGGCTCTACCGCCATCTCGACGACTTTCCCGCCCCGGCCGCGCTGCTCGGCGACGCGGGCACCGTGCACCGGCTCAAGCAACGGCAGCTGGAGTACTACCAGCGGCTGTGGCAGGGCCCCTACGACCGCGACTACATCGATAACCGCCTGCGCATCGGCCTGATCCACCACATCAACGGGGTCGAACTGAAGTGGTACCTGGCCGCCTACCGGCTGTACCTGGAACAGATGCTGGCCCCGCTGTGCGGCCAGGGCGCCGACGCGCAGCTGTTTTCCAGCCTGCTCAAGGCGGTGTTTTTCGACATGACCCTGGCCATCGACACCTACAGCGCCGCCCAGCGCAAGGCGCTGGAGGACAGCGAGGCCCGCTTCGCGCGCGCCCTGCGCGGCGCCCATGACGGGATCTGGGACTGGCACCCGGGCGCGGACACGCTCTACGTCTCCGAACGCTGGGCCGAAATGATCGGGCTGGAGCGGCGCAACCTCGGCCAGACCAGCGACGCCTGGTTTTCCCGCGTCCATCCCGATGACCTGCCGGGCCTGCACCAGGCCATCAATGCGCACCTGCACGGCGAATCGCACTGGATCCATCACGAGTACCGCATCCGCTGCCGCAATGGCGACTGGCTGTGGGTGCTCAGCCGCGGCGTGGCCGAGGCCGAACGCGACGGGCAGCTGCGCATCACCGGCTCGCAGAGCGACATCAGCCGGCGCAAGGCCGTCGAGCACCAGCTGCACCACGCCGCCCGCCACGATCCGCTGACCGGGCTGGCCAACCGCCTGCGCCTGGACGAACTGCTCCTGCACACCCAGCGCCAGCTGCACGAAACCGGCAACGGCCAGGCCGCGGTGCTGTTCATCGACCTGGACCGCTTCAAGCTCATCAACGACAGCTTCGGCCACCTGTTCGGCGACGGCGTGCTGGTCGAGGTCGGCCGCCGGCTCGCGCAGTGCCTGCGCGCCGACGACCACCTGTTCCGTTTCGGCGGCGACGAATTCGTGGTGCTGCTGGCCGACCCCGGCAGCGCCGGGCGCGCCGAACAGGTCGCCCAGCGCATCCTCGGCCACCTGCACCAGCCGATGCGCGTGGACGACCGCACCCTGGTGGTCAACGCCAGCATCGGCATCGCCACCCTGCAGGCCAGCGCCGACCTGAACGACGCCCTGCAGGCCGCCGACCTCGCCCTGCACCAGGCCAAACAGGCCGGCAAGGCCCAGTTCGCCCACTACAGCGCCGGGCTGCAGGCCAGCGCGCAGCGCCAGCTGGAACTGGAGAGCGCGCTGGGCCAGGCGCTGGCACGCAGCGAGTTCGTGCTGCACTACCAGCCGATCCACCGCCTGGACGCGCACGACCCGCCGATGGTCGGGGTCGAGGCGCTGCTGCGCTGGCGCCACGACGGGCGCCTGGTCCCCCCGCTGGAGTTCATCCCCTCGCTGGAGGAATCCGGGGAAATCGTCCAGGTCGGCGACTGGGTGCTGCGCGAGGCCTGCCGGCAGACGCGGGCCTGGCAGCTGGCCGGGCACCGCCACCTGTACTGTTCGGTCAACCTGTCCCGGCGCCAGCTGCAGCAGGACGATTTCGTCGCGCGGGTGGTCGCCATCCTCGATGACACCGGCCTGCCCGCGGCCAGCCTGGTGCTGGAAATCACCGAGACCCACCTGATGCAGGACAGCAACGCCACCCTGGGCGCGCTGCGGCGCCTGGCCGCGCTGGGCGTGCGGCTGGCGCTGGACGACTTCGGCACCGGCTATTCATCGCTGGGTTACCTCAAGCGCTTCCCGCTGCACATGCTGAAGATCGACAAGAGCTTCATCGCCGGCCTGCCCGGCGACGCCGAGCTGGGGGTGATCAGCCGCGCCATCATCGGCCTCGGCCACAGCCTCGGCCTGGAGGTGGTGGCCGAGGGCGTCGAGCACGCCCGCCACCTGGAGTTCCTGCGCGCCGAGGGCTGCCCGCTGGCCCAGGGCTACGGCTTCAGCCCGCCCTGCCCGGCCGCGGTGCTGGAGCGCCTGCTCCAGGACGGTGCTGCGTCGCCGCCGCTGGCGGCCCCGCATCCGGCGGCGCTAGGCGCGTCGGCGGCGACTGGGTGA
PROTEIN sequence
Length: 751
MGAVDTLQELMRRIGLGQAEISERGRLLEWRQDDAQRLNENAARMADAQAAFIERLYRHLDDFPAPAALLGDAGTVHRLKQRQLEYYQRLWQGPYDRDYIDNRLRIGLIHHINGVELKWYLAAYRLYLEQMLAPLCGQGADAQLFSSLLKAVFFDMTLAIDTYSAAQRKALEDSEARFARALRGAHDGIWDWHPGADTLYVSERWAEMIGLERRNLGQTSDAWFSRVHPDDLPGLHQAINAHLHGESHWIHHEYRIRCRNGDWLWVLSRGVAEAERDGQLRITGSQSDISRRKAVEHQLHHAARHDPLTGLANRLRLDELLLHTQRQLHETGNGQAAVLFIDLDRFKLINDSFGHLFGDGVLVEVGRRLAQCLRADDHLFRFGGDEFVVLLADPGSAGRAEQVAQRILGHLHQPMRVDDRTLVVNASIGIATLQASADLNDALQAADLALHQAKQAGKAQFAHYSAGLQASAQRQLELESALGQALARSEFVLHYQPIHRLDAHDPPMVGVEALLRWRHDGRLVPPLEFIPSLEESGEIVQVGDWVLREACRQTRAWQLAGHRHLYCSVNLSRRQLQQDDFVARVVAILDDTGLPAASLVLEITETHLMQDSNATLGALRRLAALGVRLALDDFGTGYSSLGYLKRFPLHMLKIDKSFIAGLPGDAELGVISRAIIGLGHSLGLEVVAEGVEHARHLEFLRAEGCPLAQGYGFSPPCPAAVLERLLQDGAASPPLAAPHPAALGASAATG*