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SCNpilot_cont_500_bf_scaffold_4157_15

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 11554..12123

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 modulation protein n=4 Tax=Rhizobium/Agrobacterium group RepID=K5CP42_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 190.0
  • Bit_score: 311
  • Evalue 4.90e-82
  • rbh
putative sigma (54) modulation protein similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 190.0
  • Bit_score: 311
  • Evalue 1.50e-82
  • rbh
Sigma-54 modulation protein {ECO:0000313|EMBL:EMS99277.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 190.0
  • Bit_score: 311
  • Evalue 6.90e-82

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGAGTGTCCGTGTATCCGGGAAACATATGGAGATTGGCGAAGCGTTCCGTCAGCGGATCGAAGGCCACATCGGGGAGGCAGTGACCAAGTATTTCGACGGGGGATATTCGAGCCTGGTCACGGTTGAAAAGTCCGGTTCGCGTTTTTCTGCAGATTGCAAGATTCACCTGGACAGCGGGGTGAACCTGCATGCCACGGGAGATGCAAACGATCCGCAAGCGGCATTCGATGGAGCGGCCGAGCGTATCGAAAAGCGCCTGCGCCGTTACAAGAGGAAACTGAAGGACCATCACAACGGCGCAAACGGCAATGGTTCCGTCGCCTATACCGTGATGGATGCCGTCCCTGAAGAAGACGAAGAGATCGCCGAGGATTTCGCACCGACCATCGTCGCCGAAAGCAGCAGACCGCTGCAGGTGATGTCGGTGGCGAGCGCGGTGATGGCTCTCGATATGACCGATGAGCCGGTCTTTCTGTTCCGCAGCCCCGGCCAGGAACAGTTGAACATCGTCTACCGTCGTCGCGACGGCAATATCGGCTGGATCGATGCGGCCAGCATCAAGGGCTGA
PROTEIN sequence
Length: 190
MSVRVSGKHMEIGEAFRQRIEGHIGEAVTKYFDGGYSSLVTVEKSGSRFSADCKIHLDSGVNLHATGDANDPQAAFDGAAERIEKRLRRYKRKLKDHHNGANGNGSVAYTVMDAVPEEDEEIAEDFAPTIVAESSRPLQVMSVASAVMALDMTDEPVFLFRSPGQEQLNIVYRRRDGNIGWIDAASIKG*