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SCNpilot_cont_500_bf_scaffold_7124_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 8488..9723

Top 3 Functional Annotations

Value Algorithm Source
opuAA2; glycine betaine transport ATP-binding protein OpuAA (EC:3.6.3.32) similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 416.0
  • Bit_score: 311
  • Evalue 3.30e-82
  • rbh
Glycine betaine transport ATP-binding protein OpuAA n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RF80_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 416.0
  • Bit_score: 311
  • Evalue 1.10e-81
  • rbh
Putative ABC transporter, quaternary amine uptake transporter (QAT) family, ATPase/permease fusion protein {ECO:0000313|EMBL:AAY91826.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 416.0
  • Bit_score: 309
  • Evalue 9.60e-81

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGACCTTTCAGCCAGCCGGGGCGGCGACCATCGCTGCGAAAACACCGGCGTCGGAAACCGCCCGGCGAAACCAGCCGCTCCAGTCCTTCGACCTGCTGGTCGGCCCTCTGTCGTTTTCGCAGGCGGCGCGGCGCGGCCTTGCCTTCTATCTGCTGAGCGACGGCATCGCCGTCTGGCTGGCGACAACAGGGCTGGTTGCCCAGGCGTTTGTGCTTCTCGGCCTGTCGCGCCTTCTTGCCATCGCCTTCGGCTGGCTTGCCGTCGGGCGGCGCTCCGCGCGGCGCGGTCTCGGGGCCGTGCGCCGGCCGTGGCTAGAGGCGCTGCTCTATCTCTTCACGCTTGCCGTCGTCGCGGCGGCCAACGGCACGGGGTCGTTTGCGGCCTCGCTCTCCGGCTTTCCGGCCTCGCAGGCCCTGCGGGTGAGCGCCGCGACCGCCATCGACGCGGCGGTCGGTTATCTCACCGTGCAGGGCGACGGTTTCTTCCGCGTTGTGACGCGCGGGCTCCTGTCGCTGCTCAAGGGCCTGGAGGCGCTCCTGACGCTGACGCCCTGGCCGGTGCTGTTTGCCGTGATCGGCTTCGCCGCCTGGAAACGCGGCGGCCCGATGCTGCTCGCGGTGGTCTGGGCGGCGCTCGGTTATCTCGGCCTGTTCGGATATTGGGCGGAAGCCCTGCAGGCCTCCGCGCTGGTGCTGGCGTCCCTATGCGTCTGCCTCGTCATCGGCATTCCCGTCGGCATCCTGCTGGCGAAAAGTCCGGTGAGCCGCGCCATCGCCTCGCCGGTCCTCGACCTGATGCAGACGATGCCGAGCTTCGTCTACCTGCTGCCGGCCGTGGCCTTCTTCTCCATCGGCAAGCCGCCGGCGCTGATCGCCACGGTGATCTTCGCGCTGCCGCCGCTCGTCCGCCTGACATGTCTCGGTATCGAGCAGGTGCCGCTGCATGTTCGCGAGGCGATGCAGGCCCATGGGGCGACGCCGCTGCAGACCCTGCTCAAGGCGGAGCTGCCGCTGGCGCTGCCTTCCATCCGCACCGGGATCAACCAGACGATCATGATGTGCCTATCGATGGTGGTGGTCGCGGCGCTGATCGGCGGCGGCGGGCTTGGCTACAACGTGCTCTTCGCGCTTCAGAACGTCCAGTATGGCGAGGGCATTCTCGCCGGCCTCGGCATCGTTTTCTGCGCAGTGCTGTTCGATCGCCTCGCGGGCAGCGGCCGCAAGGGCGGCGCTTGA
PROTEIN sequence
Length: 412
MTFQPAGAATIAAKTPASETARRNQPLQSFDLLVGPLSFSQAARRGLAFYLLSDGIAVWLATTGLVAQAFVLLGLSRLLAIAFGWLAVGRRSARRGLGAVRRPWLEALLYLFTLAVVAAANGTGSFAASLSGFPASQALRVSAATAIDAAVGYLTVQGDGFFRVVTRGLLSLLKGLEALLTLTPWPVLFAVIGFAAWKRGGPMLLAVVWAALGYLGLFGYWAEALQASALVLASLCVCLVIGIPVGILLAKSPVSRAIASPVLDLMQTMPSFVYLLPAVAFFSIGKPPALIATVIFALPPLVRLTCLGIEQVPLHVREAMQAHGATPLQTLLKAELPLALPSIRTGINQTIMMCLSMVVVAALIGGGGLGYNVLFALQNVQYGEGILAGLGIVFCAVLFDRLAGSGRKGGA*