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SCNpilot_cont_500_bf_scaffold_7124_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 9757..10698

Top 3 Functional Annotations

Value Algorithm Source
ABC-type proline/glycine betaine transport system, periplasmic component n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZYB3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 232.0
  • Bit_score: 185
  • Evalue 6.70e-44
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETX12527.1}; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis DSM 15871.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 239.0
  • Bit_score: 196
  • Evalue 5.30e-47
glycine betaine ABC transporter substrate binding protein; K02002 glycine betaine/proline transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 228.0
  • Bit_score: 165
  • Evalue 2.30e-38

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Taxonomy

Marinomonas ushuaiensis → Marinomonas → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCAGATGAAAACATGGATCCGCGCGCTGGCGATGACCGCCGGGCTGACACTGTTGCAATCGGCTGCCAGCGCCGGTGAGAAGATCGTGCTGGCCGACCTGACTTGGGACGAGCCGCGGGCGGTGAATGCGGTTCTCTCCGAAATCCTGACCACCACCTACGGCGCCGATGTCGGCCTGATCGCCGCCGACCAGACGGCCGTCTTCGCGGCGATGGCCAAGGGCGACGGCTCCGTCGACGTGCATCCGGCAGTCTGGTCCGGCGCACAGCAAAGCAATATCGACCGTTTCGTGACCGGCGAGGGCAAGGTTCGGCTGAATGCAAAGCCCTACAACGCGACCGATGGCTTCTACATCCCTCGCTTCTTCGCCGAGAAGCATAACATCAAATCGATCGAGGATCTGAAGAAGCCGGAGATCGCCGCCCTGTTCGACATCAACGGCGACGGTCGCGGCGACTACTGGCCCGGTGCGCCGGGCTGGGGCGTCACCAATATCTATCGCATCAAGGGCGTCAGCTACGGGCTGGAAGCGCTCTACGATCCCATCGTCGCCTCCGACGCCTTGCTGAAAACCCAGCTTGCCAGCGTTGAGGCGAAGAAGGAGGGTGGGTTGCTGTTCTATTACTGGAAGCCCGAAGCCCTGCACCAGGCCTACGACCTGGTACAACTCCAGGAGCCTCCCTTCGACGGTTTGGCTGACGAAAAGCCGCATCACCTGCGCCACCCCGCCGCAGCCGATCTACATCGCCTATTCCGCATCGCTGGAGCAGCGGGCGCCCGATATCGCCGCCTTCCTGAAACGGGTGGCCATCGAACCGGAGGATGTCGGCGCCTGGATCTACGCCATGACCATCGAGAAGAAGGAACCGGCGGCGGTGGCCAAGGAATGGGTGGCGGCCCATGCCGAGCGCGTCAAGGCCTGGACGGAAAAATAACGTAA
PROTEIN sequence
Length: 314
MQMKTWIRALAMTAGLTLLQSAASAGEKIVLADLTWDEPRAVNAVLSEILTTTYGADVGLIAADQTAVFAAMAKGDGSVDVHPAVWSGAQQSNIDRFVTGEGKVRLNAKPYNATDGFYIPRFFAEKHNIKSIEDLKKPEIAALFDINGDGRGDYWPGAPGWGVTNIYRIKGVSYGLEALYDPIVASDALLKTQLASVEAKKEGGLLFYYWKPEALHQAYDLVQLQEPPFDGLADEKPHHLRHPAAADLHRLFRIAGAAGARYRRLPETGGHRTGGCRRLDLRHDHREEGTGGGGQGMGGGPCRARQGLDGKIT*