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SCNpilot_cont_500_bf_scaffold_9620_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(11598..13022)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 472.0
  • Bit_score: 810
  • Evalue 1.50e-231
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 472.0
  • Bit_score: 809
  • Evalue 7.70e-232
DNA ligase n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A244_RHIET similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 472.0
  • Bit_score: 810
  • Evalue 1.10e-231

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
ATGCCGTCCGATACCCAGTTCGGCATGGTGCAAAAATTCGGGGAGTGGGGCTTTCCGGTCAATCCGCTGATGAAGCGGCTGCATTCGGTGGCCGATATCCTGGCCCATTATCACGCGATCGGCCTGGAACGGCCGGAACTGGATTACGATATCGACGGCGTCGTCTACAAGGTCGATCGGCTGGATCTGCAGCAGCGTCTCGGCTTCCGCTCGCGCTCGCCGCGCTGGGCGACGGCGCATAAATTTCCGGCCGAGCAGGCGTTCACCACGGTCGAGGCCATCGATATCCAGGTCGGGCGCACCGGCGCGTTGACGCCGGTGGCACGGCTGACGCCGGTGACGGTCGGCGGCGTCGTCGTCACCAATGCGACGCTGCACAATGCCGATTACATCGAAGGCATCGGCAATAGCGGCGAACGCATCCGCCCCGAGGGCCACGATATCCGCATCGGCGACACCGTCGTCGTCCAGCGCGCCGGCGACGTCATCCCGCAGGTGCTGGACGTGGTGCTGGAGAAGCGCGCGGAAGATGCCGCAGCGTATGAGTTTCCCAAGAAATGTCCGGTGTGCGGTTCCCACGCGGTGCGAGAGCGCAACGAGAAGACCGGCAAACTCGATTCGGTGACCCGCTGCACCGGCGGTTTCGTCTGCCGGGCGCAGGCGACGGAACATCTGAAGCATTTCGTCTCGCGCAATGCCTTCGACGTCGAGGGTCTCGGCTCGAAGCAGGTCGATTTCTTCTTCGAGAGCGAGGATCCGGCGCTGCAAATCCGCACGGCGCCGGATATCTTCACGCTCAAGGCGCGTCAGGAGTCGTCGCTTGCCAAGCTGGAAAACATCGACGGTTTCGGCAAGGTCAGCGTGCGCAAACTTTTCGAGGCGATCGACAAGCGCCGCGACATCGCGCTGCATCGGTTCATCTATGCGCTCGGCATTCGCCATGTCGGAGAAACCACCGCTAAGCTGCTGGCGCGCTCCTACGGCACCTACGAGGCGTTTGCGGCAGCAATGAAGGAGGCGGCGCCGCTTGCCGGCGAGGCGTGGAACGAACTCAACGCCGTCGAGGGTATCGGCGAGATCGTCGCCCGTTCCATCGTGGAATTCTACAAGGAGCCGCGCAATATCGAGGTGGTCGACCGGTTGCTGGGCGAAGTGCGTCCCGAGGCGGCGGAGCAGCCGGTGACGACGGCAAGCCCGGTCGCCGGCAAGACGGTGGTGTTCACCGGCTCGCTGGAAAAGATGACCCGCGACGAGGCCAAGGCCGGCGCGGAGCGGCTGGGCGCGAAGGTCTCCGGCTCCGTCTCGAAGAAGACGGATATCGTCGTTGCCGGCCCCGGTGCCGGCTCGAAGCTCGACAAGGCGCGCGAATTCGACATTCGCATCATGGATGAGGATGAGTGGCTCGCCTTCATTGCCGAAGCCTGA
PROTEIN sequence
Length: 475
MPSDTQFGMVQKFGEWGFPVNPLMKRLHSVADILAHYHAIGLERPELDYDIDGVVYKVDRLDLQQRLGFRSRSPRWATAHKFPAEQAFTTVEAIDIQVGRTGALTPVARLTPVTVGGVVVTNATLHNADYIEGIGNSGERIRPEGHDIRIGDTVVVQRAGDVIPQVLDVVLEKRAEDAAAYEFPKKCPVCGSHAVRERNEKTGKLDSVTRCTGGFVCRAQATEHLKHFVSRNAFDVEGLGSKQVDFFFESEDPALQIRTAPDIFTLKARQESSLAKLENIDGFGKVSVRKLFEAIDKRRDIALHRFIYALGIRHVGETTAKLLARSYGTYEAFAAAMKEAAPLAGEAWNELNAVEGIGEIVARSIVEFYKEPRNIEVVDRLLGEVRPEAAEQPVTTASPVAGKTVVFTGSLEKMTRDEAKAGAERLGAKVSGSVSKKTDIVVAGPGAGSKLDKAREFDIRIMDEDEWLAFIAEA*