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SCNpilot_cont_500_bf_scaffold_9620_18

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(13076..13711)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|RuleBase:RU000618};; Flags: Fragment;; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 289
  • Evalue 3.10e-75
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 163.0
  • Bit_score: 286
  • Evalue 5.90e-75
DNA ligase (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0VKT6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 289
  • Evalue 2.20e-75

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGTCCGCTGAAAATCCCAATGTCGATATCATGACGATGGAAGAGGCCGCTGCAGAACTGGAGCGGCTGGCGCGGGAGATCGCCCATCACGACGCCCTCTATCACGGCAAGGATGCGCCGGAGATTTCGGATGCCGATTACGATGCGCTGAAGCGGCTGAACGACGCGATCGAGACGCGCTTTCCCGAGCTGGTGCGCGAAGACAGTCCGTCGCGGCGGGTGGGCGCTGCACCCTCGGTCACCTTTTCGCCGGTCGTGCATGCCCGGCCGATGCTGTCCCTCGACAATACGTTTTCGGACGAGGATGTCAGTGATTTCGTCGCCAGCGTCTATCGATTCCTCGGCCACCTGCCGGATGATTCCATCGCCTTCACCGCCGAACCGAAGATCGACGGCCTTTCCATGTCGCTGCGCTACGAGAACGGACGGCTGGTCAGCGCCGCGACGCGCGGCGACGGCACGACAGGCGAAAACGTCACCGCCAATGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTCCTGGCGCTCAACCGGCAGATGGAAGCAGAGGGCAAGCAGACCTATGTCAACCCTCGCAACACCGCAGCCGGTTCGCTCCGCCAGCTCGACGCCAAAGTAA
PROTEIN sequence
Length: 212
MSAENPNVDIMTMEEAAAELERLAREIAHHDALYHGKDAPEISDADYDALKRLNDAIETRFPELVREDSPSRRVGAAPSVTFSPVVHARPMLSLDNTFSDEDVSDFVASVYRFLGHLPDDSIAFTAEPKIDGLSMSLRYENGRLVSAATRGDGTTGENVTANVXXXXXXXXXXXXXXISWRSTGRWKQRASRPMSTLATPQPVRSASSTPK*