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SCNpilot_cont_500_bf_scaffold_14894_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(9758..10531)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBQ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 257.0
  • Bit_score: 306
  • Evalue 2.80e-80
  • rbh
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EYR78720.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 257.0
  • Bit_score: 306
  • Evalue 3.90e-80
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 258.0
  • Bit_score: 297
  • Evalue 3.10e-78

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAACCCGTTGATCCCGTGCTCGACACCGATCTTTCCGCCTATGTCGACAACCAGCTCGACATTAACCGCCGCATTGAGGTCGAGGCCTATCTTTCGGAAAATCCCGTGATTGCCGCGCAGGTGATGGCCGATCTCAGCCTCAAGGGCGAGTTGCGGCTGGCGCTGGCCGATCAGCGGTCTTCGGTGCGGCCGCAGACGCGCGACGCGGCGCGGCGGCTGGAATCGGCGCTGTCGCGCGGCCTCTTCGTCGCCGCGTTCCGCCGGGCGGCGGCCATCGTGCTTCTGGTCGGCGCCGGCTGGGTGGCGAACGCCCATTTCGGCCCCTTCGGCGCGACCCAGGTAATTGCCTCCGTGCAGCCCCCGCCCTTCGTCGAGGAGGCGGTGCGCGCCCACCAGACGGCGGTGCTTCGCGAAACCATGCCGTCGCAGGCGGAGATATCCGCCTATGACCCCGCCGACATCCGCGCCGCGACCGGCATCGTCATGCCCGAGATCCCCACGGACTGGAAGGTCATCGACGTACAGGTCTTCCCCTCCGCATTCGGGCCGAGCGTGGAGATGGCCGTCGCGCCGGCCGCAAACGAGGTGCTGTCACTCTTCGCCGTCCGTCCCGGCAGCTTTGCCGTGCAGAAGGCGCTGCCGATGGGCGTGGGGACGACGCAATCCTCATACTGGCAGATCGGCGAGGTCGCCTATGCCCTCGTCTCCAGTTCCCGCGATGCCGGCGATCTCAACGGCATGGCCGAAAAACTCGCCGCCTCGCTCTATTGA
PROTEIN sequence
Length: 258
MKPVDPVLDTDLSAYVDNQLDINRRIEVEAYLSENPVIAAQVMADLSLKGELRLALADQRSSVRPQTRDAARRLESALSRGLFVAAFRRAAAIVLLVGAGWVANAHFGPFGATQVIASVQPPPFVEEAVRAHQTAVLRETMPSQAEISAYDPADIRAATGIVMPEIPTDWKVIDVQVFPSAFGPSVEMAVAPAANEVLSLFAVRPGSFAVQKALPMGVGTTQSSYWQIGEVAYALVSSSRDAGDLNGMAEKLAASLY*