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SCNpilot_cont_500_bf_scaffold_14894_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(10518..11057)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rhizobium sp. CF122 RepID=J2I501_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 177.0
  • Bit_score: 257
  • Evalue 1.00e-65
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL50945.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 177.0
  • Bit_score: 257
  • Evalue 1.50e-65
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 179.0
  • Bit_score: 254
  • Evalue 2.80e-65

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGACCAAGGAAAAACGCCCTTTCGACGTGATCGGCCAGCTTGCGACATTGCGACGCTATGCGCGCTCGCTGGTGCGCAATCCCGAGGATGCGGAGGATCTCGTCCATGATGCGCTGGTGCGCGCCTATGAGCGCGAGCAGACCTTCCGGCGGGGCGGCAGCATTCGCGGCTGGCTGCTGTCGGTGGTCCACAACACCCATGTCGACCGGCTGCGGCGCTCCCGCTCGCAGGCGCGCCGCGCCGAAGCCGCCGCCGAGGTCGCGGAAACCGCGCAAGCCGCCGACCAGGACCACGCCGTGCGGCTGCGCCAGGTGCGCGAAGCGTTTTTCGACCTGCCGGAGGAGCAGCGCGAGGCGCTGCACCTCGTCGCCATCGAAGACCTCTCCTACCAGGAGGCCGCCGATGCGCTCGGCATTCCCGTGGGCACGCTGATGTCGCGCGTTTCGCGCGCCCGCGCCCGGTTGCGCAATTTCGAGGACCAAGGCGGCCCCGCCCGCCATCTCCGCCTGATTGGGGGACAAGACAATGAAACCCGTTGA
PROTEIN sequence
Length: 180
MTKEKRPFDVIGQLATLRRYARSLVRNPEDAEDLVHDALVRAYEREQTFRRGGSIRGWLLSVVHNTHVDRLRRSRSQARRAEAAAEVAETAQAADQDHAVRLRQVREAFFDLPEEQREALHLVAIEDLSYQEAADALGIPVGTLMSRVSRARARLRNFEDQGGPARHLRLIGGQDNETR*