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SCNpilot_cont_500_bf_scaffold_244_36

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 32921..34186

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 421.0
  • Bit_score: 789
  • Evalue 3.30e-225
transcription termination factor Rho n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D8F3AB similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 421.0
  • Bit_score: 789
  • Evalue 1.80e-225
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 421.0
  • Bit_score: 789
  • Evalue 7.30e-226
  • rbh

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCAGGAAATGAAATTACAGGAACTCAAGAGCAAGACTCCGACCGATCTGATCGCGTTCGCGGAATCGCTGGAGGTCGAGAACGCCAGCGTGCTGCGCAAGCAGGAGCTGATGTTCGCGATCCTGAAGAAGCTTGCCATGCAGGAGACCGAGATCGTCGGAGAGGGCGTGGTCGAGGTCCTGCAGGACGGGTTCGGCTTCCTCCGCTCGGCCAATGCGAATTATCTGCCAGGGCCTGACGACATCTATATTTCGCCCTCGCAGATACGGCGCTTCTCGCTCAAGACCGGCGACACGGTCGAGGGACCGATCCGCGGCCCGAAGGAGGGCGAGCGCTATTTCGCGCTGCTGAAGGTGAACACCGTCAATTTCGAGGACCCCGAGAAGATCCGGCATAAGATCCATTTCGACAATCTGACGCCCCTTTATCCGAACGAGCGGATCAAGATGGAGGTGGAGAACCCGACGACCAAGGATTTGTCGCCGCGCGTCATCGACCTCGTCGCACCGCTAGGCAAGGGCCAGCGCGGGCTGATCGTCGCGCCGCCGCGAACCGGCAAGACGGTTCTGCTGCAGAACATCGCCCATTCGATCACGGCGAATCATCCGGAATGCTACCTGATCGTGCTTCTGATCGACGAGCGGCCGGAGGAAGTGACCGACATGCAGCGCTCCGTGAAGGGCGAGGTGGTGTCCTCGACATTCGACGAGCCGGCCTCGAGGCACGTCCAGGTGGCCGAGATGGTGATTGAGAAGGCAAAGCGCCTGGTCGAGCATGGCCGTGACGTGGTGATCCTGCTCGATTCCATCACGCGCCTCGGCCGCGCCTACAATACGGTGGTGCCGTCCTCGGGCAAAGTGCTGACCGGCGGCGTCGACGCCAACGCGCTGCAGCGTCCCAAGCGCTTTTTCGGCGCGGCGCGCAACATCGAGGAAGGGGGCTCGCTGACGATCATCGCCACAGCGCTCATAGACACCGGCAGCCGCATGGACGAGGTGATCTTCGAGGAATTCAAGGGCACCGGCAATTCGGAAATCGTGCTCGACCGCAAGGTCGCGGACAAGCGTATCTTCCCGGCGATGGACATCCTGAAGTCCGGCACGCGCAAGGAGGACCTGCTTATCGCACGGCACGACCTCCAGAAGATCTTCGTGCTGCGCCGCATCCTGGCGCCGATGGGAACGACCGACGCCATCGAGTTCCTGATCGACAAGCTGAAGCAGACAAAGTCGAACGCCGACTTCTTCGACTCGATGAATACCTGA
PROTEIN sequence
Length: 422
MQEMKLQELKSKTPTDLIAFAESLEVENASVLRKQELMFAILKKLAMQETEIVGEGVVEVLQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVNTVNFEDPEKIRHKIHFDNLTPLYPNERIKMEVENPTTKDLSPRVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPASRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAMDILKSGTRKEDLLIARHDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKSNADFFDSMNT*