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SCNpilot_cont_500_bf_scaffold_629_2

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 958..1923

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPE7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 321.0
  • Bit_score: 592
  • Evalue 1.90e-166
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EYR83978.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 321.0
  • Bit_score: 592
  • Evalue 2.60e-166
hypothetical protein; K11900 type VI secretion system protein ImpC similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 321.0
  • Bit_score: 520
  • Evalue 2.80e-145

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGTCGAATGTCGCCGCGGCCTCTTTCGCGCCGTTCATCGCGGCGTCGAGCCCGGACATGTTCGGACTGGAGAGCTTCACGGAACTCTCCAAGCCACGCGACCTCGAGAAGATCTTCGAGAGCTCCGAATACATCAAGTGGCGGAGCTTCCGCGACAGCGAGGACAGCCGCTTCGTCACGCTCACCATGCCGAGAGTGCTGGCGCGCGTGCCGTACGGTTCGGCTGGCCGGTCGATCGAGGAGTTCAAGTTCGAGGAGGCGCCGATCGACGCCAAGGGTGCCGTGAGCGCCATGACGTCGGACAAGTTCACCTGGATGAACGCGTCCTATGCGCTCGGCGAAAAACTTACCTCGGCGTTCTCGAAATATGGCTGGTGCGTCGCGGTCCGCGGCGCCGAAGGCGGCGGCAAGGTGGAGAACCTGCCGAGCTTCACCTTCACCAGCGACGACGGCGACATCGACCAGCAGTGCCCGACGGAGATCGGCATCACCGACCGCCGCGAGGCGGAACTGTCGAAGCTCGGCTTCCTGCCGCTCTGCCACTACAAGGGGTCGGACTACGCCGTGTTCTTCGGCTCGCAGACGACGCAGAAGCCGAAGAAATACGACAGCCCCGACGCGACCGCCAACGCCGCGATCTCGGCCCGGCTGCCTTACATCCTGGCGACGGCCCGGTTTGCCCACTATCTGAAGGTCATGGGCCGCGACAAGATCGGCTCCTTCATGGAGGCCTCGAACTGTGAGAAGTGGCTGAACAACTGGATCCGCAACTACGTCAACGGCAATCCGGACGCCAGCGCCGAGATGAAGGCGCAGTACCCGCTCGCCGAGGCCAAGGTGACGGTCGCCGAGGTGCCCGGCGCTCCGGGGTCCTACAACGCGGTCGCCTATCTCAGGCCGTGGCTGCAGATGGAGGAACTGACCGCCTCCATGCGGCTGGTGGCGCGCATCCCGCAGATGGGGTGA
PROTEIN sequence
Length: 322
MSNVAAASFAPFIAASSPDMFGLESFTELSKPRDLEKIFESSEYIKWRSFRDSEDSRFVTLTMPRVLARVPYGSAGRSIEEFKFEEAPIDAKGAVSAMTSDKFTWMNASYALGEKLTSAFSKYGWCVAVRGAEGGGKVENLPSFTFTSDDGDIDQQCPTEIGITDRREAELSKLGFLPLCHYKGSDYAVFFGSQTTQKPKKYDSPDATANAAISARLPYILATARFAHYLKVMGRDKIGSFMEASNCEKWLNNWIRNYVNGNPDASAEMKAQYPLAEAKVTVAEVPGAPGSYNAVAYLRPWLQMEELTASMRLVARIPQMG*