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SCNpilot_cont_500_bf_scaffold_629_3

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 1936..3504

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8K7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 524.0
  • Bit_score: 573
  • Evalue 2.50e-160
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EYR83977.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 524.0
  • Bit_score: 573
  • Evalue 3.50e-160
hypothetical protein; K11900 type VI secretion system protein ImpC similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 525.0
  • Bit_score: 464
  • Evalue 3.90e-128
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGGATGGGGAGAGCGCAATAGCATTGCTCGAGGCGGACGCCGACAGGGCGTCCGCCAGCGTCTTCGCGACGGCGGTTCCAAGGGGACGCCTGCGCGAGCGCGTCGTTTCCGCCGTCTCCGACGATGATCTCGGCGCCGACGGCATTGATCTGGAGGCGTTCCTCGAGGAAGAGGACACGGCCGGTCTTCTGTGCAGCTGGTTTGGCGCCGAGCCGCTCCGAGGCATGCCGTTGCGCGACGCGCGGTCGCTCAGGCTGCGCATCGACCGCGACATCGCTGCCCTCGACACATTGATTTCGGAGCAGCTCGACGCGATACTGCACCATCGGAAGTTCAAGCAGCTCGAAGCGACCTGGCGGGGCGTCTCCTTCCTCCTCGACCAGGCCGAAGGGGACGACAAGGTCGTCATCAGGCTGCTAAGCACGACCTGGAAGGAGCTTGGCCGCGACTTCGACCGCTCCGCCGAATTCGACCAGAGCGCACTTTTCGCCAAGGTCTACAGCGAGGAATTCGGGACGCCGGGCGGCCTGCCCTACGGCTTGCTTCTCTGCGACCATTCCGTCCGCCACCGGCATGGGGGCGCCGATTCGAGCGACGACATCGGGACCTTGTCGCGACTGGGAGAGGTCGCGGCCGCTTCCTTCGCGCCGTGCGTGGTCGGCGCCGCGCCCGAGTTGTTCGGGGTTTCGACGTTCGCCGAACTGTCGCACGTCCAGCATATCGACGCCGGCTTCCGCCTGGCGGAGTATCAGCGCTGGCGGCGGCTGCAGGAGAAGGAGGAGAGCCGGTTTCTCGGCGTCGGGCTGCCCCGGATCCTGTTGCGCGGGCTCCACGATGGGGCGCGGGAGCAACGGGAGGGTTTCGTCTACAGCGAGCAGGCGCTCGGCATAGAGGACTGGCTCTGGGGCAATGCGGTCTATGGCTTCGGCGCCGTCGTCATCCGGGCCTTTCGCGAATCAGGCTGGTTCGCCGACATACGCGGGGCCCGAGAGGGCGTGTTCGGGGCCGGGCGGGTCGACGGACTGCCGGCGCCGCTGTTTTCGACCGGCGAGCCGGTCGCCTATCGCCGGCCGCTCGAAGTCGAACTGACCGACCGCAAGCAGAGGGTGTTGGAGGAACTCGGCTTCATCGCGCTCTGTCCGTGCGGCTATACGAAGTCCGTCGCGTTCCTCGGCGCGCAGTCGCTGAACGTGCCGCCGGTCGCCGACACGGCGGAAAGCCGGAACGCAAGACTTTCCTCGATGCTTCAATATGTGCTCTGCGTCAGCCGCTTCTCGCATTATGTGAAGGTCATAGCGCGCGATCGCATCGGTGCGTTCACGACAGTCGCCCAGCTCGAAAGGCTGCTGGGCGACTGGCTGCGCGGCTACATGATCGGCAATCCGGACGCCAGCGACGAACTCAAGGTGCGCTATCCGCTGAGCGGCGGCAGCGTGGAGGTCACCGAACTGCCGGGCAAGCCCGGCTCCATGTCCTGCGTCATGCACATCCAGCCGCATTTCCAGTTCGACCGGATCGTGACCGGCATCCAGCTCAGGACCGAGATACAGCCGCCGCGGAACATCTGA
PROTEIN sequence
Length: 523
MDGESAIALLEADADRASASVFATAVPRGRLRERVVSAVSDDDLGADGIDLEAFLEEEDTAGLLCSWFGAEPLRGMPLRDARSLRLRIDRDIAALDTLISEQLDAILHHRKFKQLEATWRGVSFLLDQAEGDDKVVIRLLSTTWKELGRDFDRSAEFDQSALFAKVYSEEFGTPGGLPYGLLLCDHSVRHRHGGADSSDDIGTLSRLGEVAAASFAPCVVGAAPELFGVSTFAELSHVQHIDAGFRLAEYQRWRRLQEKEESRFLGVGLPRILLRGLHDGAREQREGFVYSEQALGIEDWLWGNAVYGFGAVVIRAFRESGWFADIRGAREGVFGAGRVDGLPAPLFSTGEPVAYRRPLEVELTDRKQRVLEELGFIALCPCGYTKSVAFLGAQSLNVPPVADTAESRNARLSSMLQYVLCVSRFSHYVKVIARDRIGAFTTVAQLERLLGDWLRGYMIGNPDASDELKVRYPLSGGSVEVTELPGKPGSMSCVMHIQPHFQFDRIVTGIQLRTEIQPPRNI*