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SCNpilot_cont_500_bf_scaffold_629_4

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 3506..4006

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system lysozyme-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 158.0
  • Bit_score: 150
  • Evalue 1.70e-33
Type VI secretion system lysozyme-like protein {ECO:0000313|EMBL:EYR83976.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 158.0
  • Bit_score: 150
  • Evalue 2.30e-33
type VI secretion system lysozyme-like protein; K11897 type VI secretion system protein ImpF similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 154.0
  • Bit_score: 116
  • Evalue 8.30e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGTGGACAGAAAGCCCGCGAAACGACCGGTCATCCTGCCGATCCTCGACAGGCTCCTGCAGGGAGACAATATCGAGATCGACGGCAATTTCGACCGCGCCATCCAGGTCCTGCGCGAGTCGATCCGCCGCGACCTCGAGATCCTTTTCAATACGCGGCCCTACTATCGCACGATGTCGGATGAACTGGGGGAACTGAAATCGTCGCTCATCGCTTTCGGCCTGCCCGACCTCCAGGTCCAGAAGCTCGGCGCTGCCTCCCAGCAGGAGGAATGCCGCGGGCGCATCGAGGAAGCGATCCGCCGCTTCGAGCCGCGTCTGCGGGACGTCTCGGTCGAGATACTGGAAGGGGATGCGGAGGCGCGCGAGCGCACCTTGCGCTTCAGGATCGACGCCGTCATGGATGTCGCAGAAACGGCGGAGACAGTGGTCTATGACACGTTCATCGATCCGGTCTCGGGCAGCATCATGTTCTCCGGAAACTCACCCAAAATATCATAA
PROTEIN sequence
Length: 167
MVDRKPAKRPVILPILDRLLQGDNIEIDGNFDRAIQVLRESIRRDLEILFNTRPYYRTMSDELGELKSSLIAFGLPDLQVQKLGAASQQEECRGRIEEAIRRFEPRLRDVSVEILEGDAEARERTLRFRIDAVMDVAETAETVVYDTFIDPVSGSIMFSGNSPKIS*